Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04754 ATGGAGCGCGAGAGTGAGAGGAAGAGTGACGAAGAGAGTGTCAACGGTCAACGCCGTGTGGGTATACTATACGATGACAGGATGTGTAGGCACCACACGCCCGACCATGAAGACCATGTCGAGAATCCTAATCGCCTTAGGGCTATTTGGAACGAACTCCAAAGCGCCGGCATTCTCCAACGATGCGTGCTTCTGGGGGCCAAGAAAGCCGAAGACACATATCTACATTTAGTGCATTCCAGAAGTCATGTAAACCTGATTAAGCACATTAGCTCCAGGAAATTCAATGAGCGGAGGAGCCTGATTGCCGCGGAATTTAATTCTATATATTTTAATGAAGGTTCATCTGAAGCTGCCTACCTTGCTGCTGGCTCTGCAGTAGAGGTTGTTGAAAAAGTGGCAAGCGGGGAATTGGATTCTGCTGCTGCCATTGTTAGGCCTCCAGGTCATCATGCAGAACGTAATGAAGCTATGGGATTTTGTCTATTCAACAATGTGGCGGTTGCTGCAAGATATCTCTTAGATGGAAGACCAGAATCAGGTGTGAAGAAAATTTTAATTGTTGATTGGGATGTCCATCATGGAAATGGTACTCAAAAAATGTTCTGGAATGACTCTCGGGTTTTATTCTTCTCCGTTCACAGGCATGACTTTGGGCGTTTTTATCCTTCTAATTTTGATGGATTTTACACCAAAGTTGGAGAAGGAGCAGGAGTTGGATATAATATAAATGTCCCCTGGGAGAATGGGAAATGTGGTGATGCAGATTACTTTGCAGTGTGGGACCACATCTTGCTTCCTGTTGCCAAAGAATTTAATCCAGACATAATTATAGTTTCTGCTGGATTTGATGCAGTTTACTTGTTTTGCAAGAAGGAAGTGGATTTGGCTGTTGGTGACCCTTTGGGAGGATGTCGTGTCACACCATATGGTTATTCTGTTCTGTTGGAGAAGTTGATGAATTTTGCTGAAGGTAGGATTGTACTGATTTTAGAAGGAGGATATAATCTTGATTCCATTGCAAAATCAATGCGTGCTTGCTTGGAAGTTTTGCTTGAAGGCAAGCCTGTCACTGGATCCTTGGAGGAGGCCTACCCATTTGAGTCTACATGGAATGTGATTCAAGCGGTTCGCGAGAACTTAAGTCCCTTTTGGCCTTCACTTGCATCTGAACTACCACAAGAATTAATCTCAAAAGTGGGACCGCATCTGCATACTCTAATTTCGAGTTCTGAGGATGAGGATGATAAAGGTGCACCGAGCACTGAAAATCTTGAAGAACTTCTTGAGGATGTCATAAAACCACTTTCCGAACTGAAAGTTGATGCTGATGAAGAGATTGATGTTTCTAGTACTTGGCGATCTGAATTGTCAAATGTTTATATATGGTATGCCTCATATGGATCAAATATGTGGAAAGCTAGATTTAATTGTTACCTAGCAGGTGGACAGGTGGATGGTATGGTGAAGCATTGTTCTGGTTCAGCAAACAGAACTCTGCCAAAGGAGATCCTCTGGAAGAATTTCCCTTGTCATATATTCTTTGGTCGTGATTCATCAGATTCATGGGGACAGGGAGGCGTTGCATTTCTTAATCCTGAGAAAAAGCTTACAGACAAGACCTACATGTGCATGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTATTTCAAGAAAATGCTTTAAGCCTTGATGCGGACTCTCCTTTATTTGATATAAATACCTTGAATGCTATCTCTGACAAGGAGTTCAACTCTCTTGAGGTTGTTAAGGGTGCTTGGTATGGTAATATTGTCTACTTGGGAAAGGAGCAGGATGTTCCAGTAATTACCATGACGTGTTCGCTTCTTGATATTAAACGTTTCAAATCTGGGAAGCTACCATTACGTGCCCCTAATGAAGCGTACGCCAACTCCTTAATTAAAGGGTTGGTGGAGGGAGAAAAACTTTCGGAGGCGGAAGCCATTGCTTACATAGATGGTGCTGTTAAATCGTTGTGA 2004 0.4261 MERESERKSDEESVNGQRRVGILYDDRMCRHHTPDHEDHVENPNRLRAIWNELQSAGILQRCVLLGAKKAEDTYLHLVHSRSHVNLIKHISSRKFNERRSLIAAEFNSIYFNEGSSEAAYLAAGSAVEVVEKVASGELDSAAAIVRPPGHHAERNEAMGFCLFNNVAVAARYLLDGRPESGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHDFGRFYPSNFDGFYTKVGEGAGVGYNINVPWENGKCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAVYLFCKKEVDLAVGDPLGGCRVTPYGYSVLLEKLMNFAEGRIVLILEGGYNLDSIAKSMRACLEVLLEGKPVTGSLEEAYPFESTWNVIQAVRENLSPFWPSLASELPQELISKVGPHLHTLISSSEDEDDKGAPSTENLEELLEDVIKPLSELKVDADEEIDVSSTWRSELSNVYIWYASYGSNMWKARFNCYLAGGQVDGMVKHCSGSANRTLPKEILWKNFPCHIFFGRDSSDSWGQGGVAFLNPEKKLTDKTYMCMYKISLEQFNDILFQENALSLDADSPLFDINTLNAISDKEFNSLEVVKGAWYGNIVYLGKEQDVPVITMTCSLLDIKRFKSGKLPLRAPNEAYANSLIKGLVEGEKLSEAEAIAYIDGAVKSL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04754 667 Gene3D Histone deacetylase domain 13 403 IPR037138 -
Spst3g04754 667 PRINTS Histone deacetylase superfamily signature 147 170 IPR000286 -
Spst3g04754 667 PRINTS Histone deacetylase superfamily signature 274 284 IPR000286 -
Spst3g04754 667 SUPERFAMILY Arginase/deacetylase 18 381 IPR023696 -
Spst3g04754 667 FunFam Histone deacetylase 15 13 403 - -
Spst3g04754 667 PANTHER HISTONE DEACETYLASE 9-RELATED 19 404 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Spst3g04754 667 Gene3D - 451 664 - -
Spst3g04754 667 Pfam Histone deacetylase domain 39 350 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04754 Spst-Chr3 99288209 99293349 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04754 K11406 - gmx:100788831 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04754 3 99288209 99293349 Spst3g04754 3 99288209 99293349 ECH
Spst3g04754 3 99288209 99293349 Spst9g02359 9 55873427 55874805 PCT