Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04734 ATGGTTTTGGAAACAAAGCAATCGAAGAATGTGTGTGTGATTGGAGCAGGACCAGCGGGGATAGTGACAGCCAGGGAGCTGAGAAGAGAAGGTCATGAGGTGGTTGTGTTGGAGCAGAAGCATGACATTGGAGGACAATGGCTATATGACCCAAATGTAGAACAAGAGGAGGATCCTTTGGGAAGAAACCCTTGGCTAAAGGTGCATAGTAGCATCTATCAATCTTTAAGACTCATGTCCCCAAGAGAGGTCATGGGCTTCACTGATTTCCCTTTTTTAGTCAAGAAAGATCGAGACCCAAGGAGGTTTCCTAGCCACACAGAGTTCTTTCTCTACCTCAAGGACTTTTGTGAATGGTTTAAGGTTACAGAGATTATCAAGTTCAATACAAAGGTGCTTTATGTGGGACCCTTAAACTATGGTGTCTCTGGTCAGGATTTGAAATGGCTTGTTAGAAGCAAAGAGAACAAGAGCGATGATGAAGTTGAACAAGTGTTTGACGCTGTGGTTGTGGCCACTGGCCACTACTCTAAGCCTAAATTGCCCTCCATTCAAGGAATGGATACATGGAGAAGAAAACAAATTCACAGTCACATTTACAGGTCTCCAGAGCCATTCCGCGGGGAGATAGTGGTGGTGGTTGGAAATTCTTATAGCGGACAAGAAATATCAATGGAACTTGTGAAAGTAGTGAAGGAACTCCACCTGAGTGCGAAATCACTTGACATCTACGAGGGTATATCTAAAGTGATATCCAAATACGAGAACTGTCACCTTCGTCCACAGATACACAACCTTCAAGAGGATGGGAGTGTCGTTTTCACGGATGGTTCCAGCATTCTCGCAGACACTATTTTATACTGCACTGGGTACTCCTATTCCTTCCCATTTCTTGACACAAAGGGAATGGTTGTTGTGGATGATAACAGAGTTGGTCCTTTGTACGAACACACTTTCCCTCCATCACTTGCTCCTTCTCTTTCTCTTGTGGGCATCCCCAGAAAGATCCTAGCGCTCCGTTTCTTTGAGTCTCAAGGAAAATGGATAGCTCAATTGCTTTCTGGGCAAAAAGTTTTGCCATCATGTGAGGAAATGATGAAATCAATCGAAGAGTTTTATCATTCAAGAGAGGTTGCTGGTATTCCTAAACACTACACCCATGACATTGGAGACTTTGATTATTGTGACAAATATGGAGAAAATGTAGGATTTCCAAAGTTAGAAGATTGGAGGAAAGAGTTGTGTGTATCATCTGTAGTGAACTATTTTATCAACTTGGAGACATGTCGTGATTCATGGCATGATGATGAGAAGCTTCAAGAAGCTCTTCGAAATCCTTACTTCACTCAACTTGGACTTCATCTTGAAGATCCTTCTTCGAAAAACTTGAACTAG 1395 0.4265 MVLETKQSKNVCVIGAGPAGIVTARELRREGHEVVVLEQKHDIGGQWLYDPNVEQEEDPLGRNPWLKVHSSIYQSLRLMSPREVMGFTDFPFLVKKDRDPRRFPSHTEFFLYLKDFCEWFKVTEIIKFNTKVLYVGPLNYGVSGQDLKWLVRSKENKSDDEVEQVFDAVVVATGHYSKPKLPSIQGMDTWRRKQIHSHIYRSPEPFRGEIVVVVGNSYSGQEISMELVKVVKELHLSAKSLDIYEGISKVISKYENCHLRPQIHNLQEDGSVVFTDGSSILADTILYCTGYSYSFPFLDTKGMVVVDDNRVGPLYEHTFPPSLAPSLSLVGIPRKILALRFFESQGKWIAQLLSGQKVLPSCEEMMKSIEEFYHSREVAGIPKHYTHDIGDFDYCDKYGENVGFPKLEDWRKELCVSSVVNYFINLETCRDSWHDDEKLQEALRNPYFTQLGLHLEDPSSKNLN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04734 464 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
Spst3g04734 464 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Spst3g04734 464 PRINTS Flavin-containing monooxygenase (FMO) signature 222 237 IPR000960 GO:0050660|GO:0050661
Spst3g04734 464 PRINTS Flavin-containing monooxygenase (FMO) signature 275 302 IPR000960 GO:0050660|GO:0050661
Spst3g04734 464 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
Spst3g04734 464 Pfam Flavin-binding monooxygenase-like 257 377 IPR020946 GO:0004499|GO:0050660|GO:0050661
Spst3g04734 464 Pfam Flavin-binding monooxygenase-like 9 240 IPR020946 GO:0004499|GO:0050660|GO:0050661
Spst3g04734 464 Gene3D - 11 408 IPR036188 -
Spst3g04734 464 PANTHER DIMETHYLANILINE MONOOXYGENASE 9 437 - -
Spst3g04734 464 SUPERFAMILY FAD/NAD(P)-binding domain 7 235 IPR036188 -
Spst3g04734 464 SUPERFAMILY FAD/NAD(P)-binding domain 271 435 IPR036188 -
Spst3g04734 464 Gene3D - 183 288 IPR036188 -
Spst3g04734 464 FunFam Flavin-containing monooxygenase 183 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04734 Spst-Chr3 99109714 99111950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04734 - - gmx:100817010 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04734 3 99109714 99111950 Spst3g04734 3 99109714 99111950 ECH