Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04733 ATGGAGTACTCTAATGGATTTCCTAGAAAAAGAGACGTTTCTCTTCAGGAACTTAGCAAAAGGCTCGCGGAGTTTGCTGAAGTAAGAGGATGGGATCAATATCACAGTCCCAGAAACCTTCTTTTAGCTCTTGTTGGAGAGGTGGGAGAGGTTTCTGAGATATTCCAGTGGAAAGGAGAGGTTGCAAAGGGGTTACCCAATTGGAGTTCTGATGATAAAGAGCACTTAGAGGAAGAGCTTTCAGATGTTTTGCTTTATCTAGTGCGTCTCGCTGATGTTTGTGGGCTAGATCTTGGACAAGCAGCTCTGACAAAAATAGTGAAGAATGCTCAGAAATACCCAGTTACTAGTACTGACCATACGACCACTTCCACTTGCAACTAG 384 0.4349 MEYSNGFPRKRDVSLQELSKRLAEFAEVRGWDQYHSPRNLLLALVGEVGEVSEIFQWKGEVAKGLPNWSSDDKEHLEEELSDVLLYLVRLADVCGLDLGQAALTKIVKNAQKYPVTSTDHTTTSTCN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04733 127 PIRSF UCP029826_pph 6 126 IPR025984 GO:0009143|GO:0047429
Spst3g04733 127 PANTHER - 9 124 - -
Spst3g04733 127 Gene3D - 8 119 - -
Spst3g04733 127 SUPERFAMILY all-alpha NTP pyrophosphatases 13 115 - -
Spst3g04733 127 CDD NTP-PPase_RS21-C6_like 20 109 IPR025984 GO:0009143|GO:0047429
Spst3g04733 127 Pfam MazG-like family 47 121 IPR025984 GO:0009143|GO:0047429
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04733 Spst-Chr3 99086829 99087320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04733 K16904 - gmx:100500294 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04733 3 99086829 99087320 Spst3g04733 3 99086829 99087320 ECH