Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04718 ATGGGTCCAATGCCAGAACGGCCGAAGCTGCGACCTTGTGTTTCATCTCCTTCGGAGCAAACCAATGATTTTGTGTCAAAAGCTCGATCTGAGGAGACAAACACCCTCTGCTCTCTAGCCTCCACCCTTTATTTATGCAGCATTTCGCAAACCAAACCTTTTGCTGATTCCTTGCAGTTGAATTCCCCTAAATCTCCTGCCAACATGGGGCAAGAGAACCACCACAAGCGCAGCACCAGCGGCGCCAGTTTACCCACCTCCAACGCCCGAGGGCGCGCCACCGCGCTCCCCCGCGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACCATCCTCTGCGGCTTCGTCACCATCCTCGTCCTCCGCGGCACCATCGGCGTCAACCTCGGCTCCTCTGACGCCGACGCCGTCAACCAGAACCTCATCGAGGAGACCAACCGCATCCTCGCCGAGATCCGATCCGACGCCGACCCCTCCGATCCCGACGACCAGCAACCCTTCAACCCCAACGCCACCTTTTCACTCGGCCCCAAGATCGATAATTGGGACCAAGAGCGCCAGAATTGGCTCCGTCAAAACCCTGAGTACCCTAATTCGGTCAGAGGTAAACCTCGCATCTTGCTCCTCACTGGTTCCCCTCCCAAACCCTGTGATAATCCTATTGGAGATCATTACCTCTTGAAGTCCATCAAGAACAAGATTGATTACTGTAGATTACACGGGATTGAAATTGTGTACAATTTGGCTCATTTGGATGTGGAACTTGCTGGCTACTGGGCCAAGTTGCCTATGATTCGGCGGTTGATGTTGTCGCATCCTGAGGTTGAATGGATTTGGTGGATGGATAGTGATGCTTTTTTTACTGATATGGTGTTCGAGCTTCCTATGTCTAAGTATGATGCCTATAATTTGGTTCTTCATGGATACCCTGATTTGTTGTTTGACCAGAAGTCTTGGATTGCGGTGAATACTGGGAGTTTTCTGTTTAGGAACTGTCAGTGGTCTTTGGATTTGCTTGATGATTGGGCTCCCATGGGTCCCAAGGGACCGGTTCGTGAGGAGGCAGGGAAGATCTTGACGGCAAATCTCAAGGGGAGGCCGGCATTTGAGGCCGACGATCAGTCTGCATTGATATACTTGCTGCTTTCCAAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAGAATTCGTTCTATTTGCACGGTTACTGGGCAGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCACCCCGGGTTGGGGGATGAGAGGTGGCCGTTTGTGACGCATTTCGTGGGGTGTAAGCCGTGTGGGAGCTATGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTACAATTTTGCTGATAATCAGGTGCTTAAGCTTTATGGGTTCAGGCATCGTGGTCTGTTGAGCCCCAAGATCAAGAGGATCAGAAATGAGACTGTTACTCCTTTGGAGTTTGTAGACCAATTTGATATTCGAAGGCATTCTTCAGAAAGCAAGGAAGTAAAGAGCTAG 1545 0.5068 MGPMPERPKLRPCVSSPSEQTNDFVSKARSEETNTLCSLASTLYLCSISQTKPFADSLQLNSPKSPANMGQENHHKRSTSGASLPTSNARGRATALPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDADAVNQNLIEETNRILAEIRSDADPSDPDDQQPFNPNATFSLGPKIDNWDQERQNWLRQNPEYPNSVRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYDAYNLVLHGYPDLLFDQKSWIAVNTGSFLFRNCQWSLDLLDDWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSSESKEVKS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04718 514 MobiDBLite consensus disorder prediction 156 176 - -
Spst3g04718 514 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 89 499 IPR008630 GO:0016020|GO:0016757
Spst3g04718 514 MobiDBLite consensus disorder prediction 1 22 - -
Spst3g04718 514 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 204 350 IPR029044 -
Spst3g04718 514 MobiDBLite consensus disorder prediction 57 97 - -
Spst3g04718 514 FunFam xyloglucan 6-xylosyltransferase 2 204 355 - -
Spst3g04718 514 Pfam galactosyl transferase GMA12/MNN10 family 205 443 IPR008630 GO:0016020|GO:0016757
Spst3g04718 514 MobiDBLite consensus disorder prediction 57 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04718 Spst-Chr3 98934687 98937582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04718 69 514 Glycosyltransferase AT5G07720 76.368 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04718 K08238 - gmx:100793238 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04718 3 98934687 98937582 Spst3g04718 3 98934687 98937582 ECH