Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04715 ATGGGTTCTCTCGCTGAAGACCGATCAGAGATTGTGTTCTTCGATGTTGAAACCAGCGTTCCCACCCGAACTGACAAGGGTTTTCGGATTCTCGAATTTGGAGCCATTTTGATTTGCCCCAAGACGCTCACGGAGCTCCGCAACTACTCTTCTCTTGTCCGACCCGCCGACCTCTCCGTCATCTCTCCCTTGTCCGAGCGCTGCAATGGCATCACCGCCAACGCCGTCTCCGCCGCCCCCACTTTCGCCGACATTGCTCCCCTCGTCTACGACCTTCTTCACGGGAGGATTTGGGCGGGTCATAATATCATAAGGTTCGACTGTGTTCGGATTAGAGATGCGTTTGCTGAGATTAATCAGCCGCCACCTGAACCTAAGGGGACCATCGACTCTCTAGCTTTGTTGACTCAAAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCTACTTATTTTGGACTTGGACGCCAGACACATAGGAGCTTAGATGATGTTCGGATGAATCTTGAAGTCCTCAAATACTGTGCAACAGTTCTATTCTTGGAATCAAGTCTCCCAGATATATTCACTGCAAACAGTTGGGTTTCACCAAATGCTACAACAAGAAGCCGCAGTAATGGGAAATCTCCATCACAGGGGGGCTTGTTAAATACTAATAAGGGTTCTGTAATATCATTTCCTGCAGTTGAATCCAAAGACAAAAATCATCCAATAGTTTCTTTTGCTACGAGCAGCCCAGAAGGGGATGACCTGAATATTGCAGATCCTAATATAGTTCAATTGGATCCTTTTAACTTGAGTGCTCTTGAGGAAGAAATAGAAAAAGAACCCATTAAGTCAGATGTTTCCATGGTTGAAAAATCCACGCAAGAGTCACCTGATTTGGCTTCCTCCTCTTCTGTGTTTCCGCCCTGCAGCGGCTCTATTCTTGTTTTAGAACCGGATGGAATATGTATCCCTTCTATTAATGCATCTCTTGTTCCATCTTTTCATGGTAGTCAAAGGATAGAGTTACTGCATGAAGGTTTCCCATTTCAACTTCATTGTACTGATTTGAAAGTGCGGTTTGGAATAAGCACAAAGTTTATTGATAATGCTGGCAGGCCACGATTGAGTTTTGTGGTTGATTCATCACCAACCCTATGTAATGTTCTTGATGCATGTGACGGCATTGCGCAGAAGTTAACTGAGGATTCTGGTAGCAGCTCTGATTGGAGGCCTGTTGTTGTTAGGAAAGAAGGCTTCTTCAACTATCCTACTGTCAGATTGCACGTACCTTCAGCAGTAGTCGCAGGCGTTGCCATTTATGCCACAGAAATATATCACAGAGAATCGTCTGGAGCAGTGCAAAGACTGCTCTTCAGTAAGTATGATGCTGCGGAACTTGGTTCCTTATTCACGCCTGGAACATTTGTTGATGCCTTCTTCTCCTTAGATCCCTATGACTATCGGCAGAATGCTGGGATTAAATTAGTTGCCAAAAAATTGATCATTCATTGCAAATAG 1515 0.4488 MGSLAEDRSEIVFFDVETSVPTRTDKGFRILEFGAILICPKTLTELRNYSSLVRPADLSVISPLSERCNGITANAVSAAPTFADIAPLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEPKGTIDSLALLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPNATTRSRSNGKSPSQGGLLNTNKGSVISFPAVESKDKNHPIVSFATSSPEGDDLNIADPNIVQLDPFNLSALEEEIEKEPIKSDVSMVEKSTQESPDLASSSSVFPPCSGSILVLEPDGICIPSINASLVPSFHGSQRIELLHEGFPFQLHCTDLKVRFGISTKFIDNAGRPRLSFVVDSSPTLCNVLDACDGIAQKLTEDSGSSSDWRPVVVRKEGFFNYPTVRLHVPSAVVAGVAIYATEIYHRESSGAVQRLLFSKYDAAELGSLFTPGTFVDAFFSLDPYDYRQNAGIKLVAKKLIIHCK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04715 504 FunFam Exonuclease family protein 4 182 - -
Spst3g04715 504 SUPERFAMILY Ribonuclease H-like 10 180 IPR012337 -
Spst3g04715 504 MobiDBLite consensus disorder prediction 284 303 - -
Spst3g04715 504 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 9 493 - -
Spst3g04715 504 CDD DEDDh 12 176 - -
Spst3g04715 504 SMART exoiiiendus 10 184 IPR013520 -
Spst3g04715 504 Gene3D - 3 182 IPR036397 GO:0003676
Spst3g04715 504 MobiDBLite consensus disorder prediction 201 222 - -
Spst3g04715 504 MobiDBLite consensus disorder prediction 286 303 - -
Spst3g04715 504 Pfam Exonuclease 12 175 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04715 Spst-Chr3 98919749 98923156 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04715 - - ccaj:109808157 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04715 3 98919749 98923156 Spst3g04715 3 98919749 98923156 ECH