Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04681 ATGGCTAAGGCGTTGTTGTTCTTATTTTTTCTGTCTGGGCTTCTGCTCCTTGTTCAGGCACTACAACATCATAACAAAATTGGCTTTTATGAACTGAAGAGAGGAGATTTCAAGCTGAATTTGACAAATTACGGTGCTACAATTATGTCTGTAGTAACCCCTGATAAACACGGGAAACTAGCTGATATTGTTCTTGGCTATGACTCCATTGATTCTTACAAGAATGATACAGTTTACTTCGGTGCCCTTATTGGTCGAGTGGCGAATAGGATTGGAGGAGCTAAATTCACTTTGGATGGCAAAACCTACAATTTACCCGCTAATGATCACGGGAACACACTTCATGGTGGTAACAGAGGCTTCAGTGACGTTGTATGGTCTGTGGAATCCCACAAGAAATACAGTCATGTAACATTTACCTACGACAGTTATGAAAACGAGCAAGGTTTTCCTGGAAAACTTAAGGTCACAGTGACTTACATGCTCATTGGAACACACGAATTGGCTGTGAAAATGATTGCCAAGCCAGTGGACAAAGCCACACCAGTGAATCTAGCGCAGCATACTTACTGGAACCTTGGGGGCCACAACAATGGTGACATTCTTTCTCACATTGTTCAGATCTTTGGTTCGCACATCACAGCAGTGGACAAGCTTCTCATTCCCACTGGCGAAATCATATCTGTAAAGGGCACTCCATATGATTTCCTTGAACCAAAGAAAGTTGTAAGCCAGATTCATGAGCTTCCTGGTCTATATGATATGAATTATGTGCTAGACAAAAGTTTCCAAAAGCACTTAAGCAAGGTTGCGGTGGTGAGAGAACCTGTCTCTGGGAGGAAAATGGAGCTGTGGTCAAACCAACTTGGTCTGCAGTTCTATACTAGTGGCCAATTGAATGATACCAAAGGCAAGGATGGGGCCGTATACCACAAGTATGCTGGAATTGCCTTGGAGACACAGGGTTTCCCAGATTCTGTGAATCACCGTTACTTTCCAACACAGATTGTGAAACCTGGGGAGATTTACGAGCACATCATGCTTTACAGATTCACAGCTAACTAA 1065 0.4291 MAKALLFLFFLSGLLLLVQALQHHNKIGFYELKRGDFKLNLTNYGATIMSVVTPDKHGKLADIVLGYDSIDSYKNDTVYFGALIGRVANRIGGAKFTLDGKTYNLPANDHGNTLHGGNRGFSDVVWSVESHKKYSHVTFTYDSYENEQGFPGKLKVTVTYMLIGTHELAVKMIAKPVDKATPVNLAQHTYWNLGGHNNGDILSHIVQIFGSHITAVDKLLIPTGEIISVKGTPYDFLEPKKVVSQIHELPGLYDMNYVLDKSFQKHLSKVAVVREPVSGRKMELWSNQLGLQFYTSGQLNDTKGKDGAVYHKYAGIALETQGFPDSVNHRYFPTQIVKPGEIYEHIMLYRFTAN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04681 354 CDD galactose_mutarotase_like 30 351 IPR047215 GO:0016853
Spst3g04681 354 Gene3D - 17 353 IPR014718 GO:0030246
Spst3g04681 354 Pfam Aldose 1-epimerase 30 350 IPR008183 GO:0005975|GO:0016853
Spst3g04681 354 SUPERFAMILY Galactose mutarotase-like 21 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Spst3g04681 354 PANTHER ALDOSE-1-EPIMERASE 25 352 - -
Spst3g04681 354 PIRSF GALM 18 354 IPR015443 GO:0016853|GO:0019318
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04681 Spst-Chr3 98625517 98627312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04681 3 353 Miscellaneous Gene Families AT3G47800 58.924 1.05e-155 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04681 K01785 - gmx:100806956 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04681 3 98625517 98627312 Spst3g04681 3 98625517 98627312 ECH