Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04669 ATGTTCAACACCTACATTTGTATTGGATGCTTTGGAAATAATCATAACCATTTGACAGCTGCTGTAGTTTCGAATGATCCTTCAATTGTACAGCCCAAATATAAAGAAGAATGTTTTTCATCACTCATAAAGCCCCTTGTTGGGTGGAATATTTTGCCAGCTGATGCTGAGATCATTGACATCAACAAAAGGTTATTTACGCAGCTGAATGCTAAGTTCATGAACACTAATAATTTGGATAAGGGTGAGTTTATTAGTAGTTTGAATTCGTATGTAGAAAACATCAGGGACAAACATGCTTGGGATCTTGGTTCATCAGAAATACTCACCATTTTGAGGTATTGTCTTTCTCCATCCAAAGATGCTTATGACAGTATGGTAACTGTGAAGCTGGAGTGGGAGAGCCAAGCAGTGTTAGCCTCGTCGGTTTTGCATTTGAAGGCTTGCGACTGGGTTCCTAAACTTGAAGATGTTATAAAATATCTTGGCTTGATGCTTGATGAGAAATTTCCGTCATTGGTGTTACATCCATTGTTTCACGAGGAACTAATATCAATTGAAGAAGTGGTTAGTTGTTTAAATGCTGAAGCCAAATTTTGTCACTTAATTTTCTCGAGAGCCAAATCAAATGTCCTTCTTCGAAAATCGTCTGTTGCAGTAACAATGGATCATCGCCAATGGCGTCCCACTCCTCCCCCCAATCTCTGCCCCACTTGCTTCCTCTCCCACTTCCCCTTCTGCCCCCCTCCACCACCCTATCACCCCCACCCATTCCCACCCGATCACACTCACCAACCCCCTCTCCCTTACGCCCCGGCCAACCCTAATTTCCCCAACTTCAAGAGACCCCGAATCCACGACAACAACGACAGCAACAACAACCCTCTCAATTTCTCCGACGACCAGCGCAGGCTACAGCTCATTCGAGATCATGGAACCAACCCCTCTCACCTCCACCCTCACGCGCCACACCAACCACAACACACTCAGAACGCCTTCCCTCCACACGACGCCGTTCCGCCTCACCAACCTCACAATGCCCAATTCAGACCTTCCCCGCAACCCTTCCACCCTTATCCAGAACCCTCGCAACGCCTTCCTGATGCTTCCGCCGCCACTTATCATCACGCTCACGCTCCTCACGTTGGCATGCAGCCACCACCGCCTCACGTTAATTTCCCTTCTCACGAAGGCAACCACCACAATCATCACCAGTTGAATGGAAGTGTTGGTCACTATCCTTACCCGTACCCTGCGAGTAACCATAGCAACAATTCTTGTGATAATAACATGGAAGCTTCTAGATTCTTCAGGGGTCACTCTCAGCCTCCTCTTCCTTCTTCGCCGCCGCCGCCTCTTCCTATGGAACCATCCATGAATCAATTGAAAACGTACTTTTCACCGCCGAAGAAACCGGCTTCTCTATTTCCCGTTCACTTGAGCTCATCTCCTTCGTCTTACTCGCAAGTATCAGAACCTCACTCCTTACCTCAGCCCTATTACCCCACCGGTTTTCCTTCCGAGGCATGTTTCTCATTTTTCTCAGTATTTGACCCGTCGAAGCAGTACTTGGGAGATTCCCAACCTTTTTCGTTAAACCAGTTTTCTGCTGACAGACCTAAATTTATCGATGCTTCACATTTATTTCGACATCCTCATCGGGCTTCGCGGCCTGATCATTTTGTGATAATCTTTCGAGGTCTTCCAGGTAGTGGTAAGAGTTACCTAGCAAAGATGTTGCGCGATCTTGAGGTTGAAAATGGCGGTGATGCTCCTCGAATTCATTCTATGGACGATTATTTTATGACTGAGGTTGAAAAGGTTGAGGATAGCGAGTCATCAAAATCTTCAAGTTCAGGAAGAAACAAGAAGCCTGTGACAAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTAAAAGCTTTCAAGAAAACTGTCGAGGAAGGAGTTTTCACCTTCATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGTTGTCTCCATGTAGCATAGCTCTGGGGGTAGGGAGTTCATCATTTTCTGGTGTAACTCTCCTTCATTCCTATCTTATTGCAATTCCAATAAGACTGTTCACAAATTTGACTCCCATCATGAGACTTTCTATGACTCATGTTATGCACAAAGCTGTTAAAGATGAAAAGATCGGGGGTTGTGCTGCTCGGAATGTCCATGGATTTACACAGGAAGACATAGAAAAGATGTCTAAGCAATGGGAAGAAGCTCCGTCCTTGTATCTACAGCTTGATGTGAAGTCATTATTTCATGGGGATGATCTAAAGGAAAGCAGAATACAGGAGGTTGACATGGATATGGAAGATGACCTGGGTGATGTAAAACCTCCAGTTCAAGGAAGAGAAGCTGAGAAAATTGTTGATCCTCCTGTTGGGGAAGATGCAAGTTTCCTGAAGGCTGGAAAAAATTGGGGTGCTGAAGGGGAACATCCAACAGAAGTCAGGGAATTGGGTAAAAGCAAATGGTCAGAAGATTTCGGTGAAGATGACATTGATCAAACTGAAGGTATGAAGGGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGGAACGAAAATCTGTACATTGGGGTGATCAGGGTGGCAGGCCTGGGTTTTCAATTGGGGCTGCAAGGAAGGTAAATGCATTGTCTATAGTGATCGGACCTGGTGCTGGATACAACCTGAAATCTAATCCATTACCTGAAGAAGATAGTCCAAGCCGTAATAGTGTGGAATCAAAGAAGCATAGCATATTTCAAGAACGAATCCGGGCTGAACGAGAATCTTTCAAAGCTGTTTTTGATAGGAGAAGACACAGGATTGGCGGACTTGATGTGGAGGAGGACTAA 2928 0.4498 MFNTYICIGCFGNNHNHLTAAVVSNDPSIVQPKYKEECFSSLIKPLVGWNILPADAEIIDINKRLFTQLNAKFMNTNNLDKGEFISSLNSYVENIRDKHAWDLGSSEILTILRYCLSPSKDAYDSMVTVKLEWESQAVLASSVLHLKACDWVPKLEDVIKYLGLMLDEKFPSLVLHPLFHEELISIEEVVSCLNAEAKFCHLIFSRAKSNVLLRKSSVAVTMDHRQWRPTPPPNLCPTCFLSHFPFCPPPPPYHPHPFPPDHTHQPPLPYAPANPNFPNFKRPRIHDNNDSNNNPLNFSDDQRRLQLIRDHGTNPSHLHPHAPHQPQHTQNAFPPHDAVPPHQPHNAQFRPSPQPFHPYPEPSQRLPDASAATYHHAHAPHVGMQPPPPHVNFPSHEGNHHNHHQLNGSVGHYPYPYPASNHSNNSCDNNMEASRFFRGHSQPPLPSSPPPPLPMEPSMNQLKTYFSPPKKPASLFPVHLSSSPSSYSQVSEPHSLPQPYYPTGFPSEACFSFFSVFDPSKQYLGDSQPFSLNQFSADRPKFIDASHLFRHPHRASRPDHFVIIFRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVEDSESSKSSSSGRNKKPVTKKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKLSPCSIALGVGSSSFSGVTLLHSYLIAIPIRLFTNLTPIMRLSMTHVMHKAVKDEKIGGCAARNVHGFTQEDIEKMSKQWEEAPSLYLQLDVKSLFHGDDLKESRIQEVDMDMEDDLGDVKPPVQGREAEKIVDPPVGEDASFLKAGKNWGAEGEHPTEVRELGKSKWSEDFGEDDIDQTEGMKGNINALSGLIHQYGKERKSVHWGDQGGRPGFSIGAARKVNALSIVIGPGAGYNLKSNPLPEEDSPSRNSVESKKHSIFQERIRAERESFKAVFDRRRHRIGGLDVEED 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04669 975 Gene3D - 561 693 IPR027417 -
Spst3g04669 975 MobiDBLite consensus disorder prediction 311 411 - -
Spst3g04669 975 MobiDBLite consensus disorder prediction 337 362 - -
Spst3g04669 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 561 683 IPR027417 -
Spst3g04669 975 FunFam YLP motif-containing protein 1 isoform X3 561 691 - -
Spst3g04669 975 MobiDBLite consensus disorder prediction 257 299 - -
Spst3g04669 975 MobiDBLite consensus disorder prediction 920 944 - -
Spst3g04669 975 MobiDBLite consensus disorder prediction 257 276 - -
Spst3g04669 975 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 379 683 IPR026314 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04669 Spst-Chr3 98473639 98486971 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04669 K17602 - gmx:100804293 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04669 3 98473639 98486971 Spst3g04669 3 98473639 98486971 ECH