Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04646 ATGAAGACCACGAAGGGCGGCAAGGTCATGAATCCCACCGATGCTTATCGGAAGGAGCTTCGAAAGAAAGAATTGAAGAGGAATAAAAAGGAAAGAAAGAAGGTGAGGGAGGTGGGGATTTTGAAGAAAGATCCTGATCAGTTGAAGAAACAGATTGAGAACTTGGAGATGATGAAGGCTGATGGTGCTTTGGATAAAGCAAGAAAGCACAAGAAGAGACAGCTACAAGATACACTCAATCTTGTCCTAAAGAAGAGGAAGGAATATGAAGAGAAAATGCGGGAGAAGGGTGAGGCCCCAGTTATGTTCAGTCATTTGGGGCCTCCTCGAAGGAGAACAACTGCAGAAGAAGAAGAGAGGGTTAAACACCCAAAGCCTGAGGACTCTGTTTATTACCATCCTACATTAAACCCTACCGGTGCTCCACCACCAGGGAAACCTCCTATGTTTAAATCATCTATAGGACCAAGAATTCCCTTGACTGGTGCTTCATCTAGTGCTGCTGCATCATCCTCGGCAACAGAGACAGAGGATGATGTATTAGCTGTACCTCCACCTCCTCCACCACCTCCACTGCCTGATGGTAGTAATGCAAGTTCAGCAGATGGCCCTGTTTTACCTGCTTCTTTACCATTGCCTCCTCCTCCTCCCATGCCTCCAAAGCCTGCTACTGCTGTGCCTACATCATTACCACCACCCCCTTTGCCGCCTCCTCCTCCTGGTCCTCCACCTAAAGAACAAGTTGCAAATCATCCTCTTCCCCCTCCACCGCCTCCCCTACAACAATCTCAACCACCTCCACCTGGCACCAATGGAGGCGAAGGGAGAAATCTGTCTGCATTGACTGATGATTCACCTTCCAAGGATCCTGGTCAGGTGCAGCTTCCTCCACCTCCTCCACCTAATCAGGTGCCCCCAAAGACTGGTATGGTTCAGTCTGATGGTGCTGTGCTTTCTACTGAGGGTAAGAATTCACTGTCAAGCCAGGAGATCCCAAAAATGGTTGCGGGGCATCCTCCTCCAAGGCAACAAACCCCTGTTCCAGGACCCACTTTAATCCCAAGTTTACAGCCCGATGTATTACCTCCTGGAATATCCCGGTACCCGCTACCCCCACCGCCACCTGACATGAGACCTCCTTTACCTGTGTCAGGACTCCCTCCTGGTCAGGCACCACCTCCTGGAATGATGGTCCCCCTAATTCCTAGGCCACCATATGGCCCTCCACCTGGTCCTCCTCCAATGATGAGACCTCCACTTCCACCTGGTCCACCTCCAAACTTCCAGGAAGAGGATCATATAGCAACTAGGCCTCCTCCCCCTCCTCCGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTGGCGCAGCACACTCCAGAACTCACAGCGATGGTTCCTGCATCTGTGCGAGTGAGAAGAGAAACTGCAATGAATAAAACAAAAGCAAAACCGTCAGTGTCAACCTCTAGGACCGTCTCTGGGACATCAGGGCCAACCATTGTAAAAACAGAGTCGGTGAGCTCGTCATCAGCTCCAAAAGCACCGAGCATTGATGACTCGTACACGGCTTTCTTAGAGGACATGAAAGCCCTTGGTGCACTTGATGGTTGA 1629 0.5009 MKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPDQLKKQIENLEMMKADGALDKARKHKKRQLQDTLNLVLKKRKEYEEKMREKGEAPVMFSHLGPPRRRTTAEEEERVKHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLTGASSSAAASSSATETEDDVLAVPPPPPPPPLPDGSNASSADGPVLPASLPLPPPPPMPPKPATAVPTSLPPPPLPPPPPGPPPKEQVANHPLPPPPPPLQQSQPPPPGTNGGEGRNLSALTDDSPSKDPGQVQLPPPPPPNQVPPKTGMVQSDGAVLSTEGKNSLSSQEIPKMVAGHPPPRQQTPVPGPTLIPSLQPDVLPPGISRYPLPPPPPDMRPPLPVSGLPPGQAPPPGMMVPLIPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHIATRPPPPPPKPSYVKSAASTVVKRPLAQHTPELTAMVPASVRVRRETAMNKTKAKPSVSTSRTVSGTSGPTIVKTESVSSSSAPKAPSIDDSYTAFLEDMKALGALDG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04646 542 Pfam WW domain binding protein 11 7 83 IPR019007 GO:0006396
Spst3g04646 542 MobiDBLite consensus disorder prediction 158 177 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 207 266 - -
Spst3g04646 542 Coils Coil 13 33 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 267 289 - -
Spst3g04646 542 Pfam mRNA biogenesis factor 126 186 - -
Spst3g04646 542 Coils Coil 72 92 - -
Spst3g04646 542 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 534 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 181 195 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 291 306 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 339 357 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 110 129 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 486 522 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 92 525 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 364 428 - -
Spst3g04646 542 MobiDBLite consensus disorder prediction 307 331 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04646 - - gmx:100792892 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04646 3 98250654 98255577 Spst3g04646 3 98250654 98255577 ECH