Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04612 ATGTTGAACCCAAGGGAGCTTAAGAGCCACAAATCCGTAGCCACTCTCTCCCACTTCGGAACGCTAACCTCCCACCAAAAAAACCAGATTCATCTCTACGTTGAAACTCTTCTTCAATGGAACAAGCGCATGAATCTCACTGCTGTTAGAGAGGTGAATGAAGTGATGGAAAGACACGTGGAGGACTCCCTTGCGATTTTGCCTCCGTTGAGCGACTGTTACCGCTCCCACTGCGCCACTTCATGCGATAAGCTGAGTCTCGTCGATGTTGGAACTGGCGCTGGCCTTCCCGGAGTAGTTTTGGCCATAGCTCGCCCAGAGTGGGATATAACGTTGATGGAGTCTATGAACAAGCGATGCGTCTTCTTGGAGCACGTTGTCGGTGTTGTCGGGTCCTCAAACATTCAAATTGTAAGAGGAAGAGCAGAGAATTTAGGACAGAATCCTTGCTTCAGAGAGCAATTTGATGTAGCAGTGGCCAGGGCAGTTGCAGAAATGAGAATATTAGCTGAATACTGTCTTCCTTTGGTTCGCGTTGGTGGGTTGTTTATAGCTGCCAAGGGTCATGATCCTGAGGATGAAATTAAGAAAGCTGAAAGTGCCATCCAGAAGGTGGGTGCATCTCTATTGCAAGTTTGCTCAGTGGACTCGCAAAGTCCATACGGTCAGCGAACTGTTGCCATATGTTCAAAGGATCGTCCTACCCCATTGAAATATCCCCGTGATCCAGGTACACCAGCTAAAGAGCCATTGTAA 756 0.4815 MLNPRELKSHKSVATLSHFGTLTSHQKNQIHLYVETLLQWNKRMNLTAVREVNEVMERHVEDSLAILPPLSDCYRSHCATSCDKLSLVDVGTGAGLPGVVLAIARPEWDITLMESMNKRCVFLEHVVGVVGSSNIQIVRGRAENLGQNPCFREQFDVAVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPEDEIKKAESAIQKVGASLLQVCSVDSQSPYGQRTVAICSKDRPTPLKYPRDPGTPAKEPL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04612 251 CDD AdoMet_MTases 87 184 - -
Spst3g04612 251 NCBIfam 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 223 IPR003682 GO:0005737|GO:0006364|GO:0008649
Spst3g04612 251 Gene3D Vaccinia Virus protein VP39 6 251 IPR029063 -
Spst3g04612 251 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 19 228 IPR003682 GO:0005737|GO:0006364|GO:0008649
Spst3g04612 251 MobiDBLite consensus disorder prediction 232 251 - -
Spst3g04612 251 PIRSF GidB 6 234 IPR003682 GO:0005737|GO:0006364|GO:0008649
Spst3g04612 251 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 8 251 IPR003682 GO:0005737|GO:0006364|GO:0008649
Spst3g04612 251 Pfam rRNA small subunit methyltransferase G 26 216 IPR003682 GO:0005737|GO:0006364|GO:0008649
Spst3g04612 251 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 17 251 IPR029063 -
Spst3g04612 251 FunFam Ribosomal RNA small subunit methyltransferase G 7 251 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04612 K03501 - gmx:100818428 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04612 3 97922015 97924785 Spst3g04612 3 97922015 97924785 ECH