Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04610 ATGTCCCAATCACAACCCCCCTGGGCTACCAAGAAAAAACGAATGAAAGAGAAAGTTCGCAATATAAGAGGCAAAGAAGGTGGTAGGAATTTCCATAAGTTTTACCACGCATATGACAACTATATGACTTATGCATTTCCGCATGATGAACTTAAACCTCTCTCTAAAACCTTCACTAACTCCCTAAGTGAGTTAGGAAATTTGAAGCTTGAACATTTGCCTCAAGACTATAATGGTTCTGCCCTTACACTTATTGAATCGCTGTCTAGCCTTGTTATTATGGGCAATAACACTGAATTTGAGAGGGCAGTACTTTGGCTTTCAGAAAATCTGACATTTGATGTTGATGCTCGCATAAATCTTTTTGAGTGCAACATAAGAGTTCTTGGAGGACTTGTCTCTGCTCATTTACTTGCATCTGATTCTTCAAAGAAGTTGTTTCGAGGGGCTTACAAAAATCAGCTGCTAGTACTGGCTGAAGATTTAGGGAAACGCTTTCTTCCAGCATTTAATACGGCTACTGGATTGCCATATGCATGGATTAACCTGAAGCTTGTTTTCTCCTGTCCACCACAGCTGCTGTCTCTAGATATTGCTCTCCCATTGTCATGTGAACAAGCTGAGCTCTTCATTGGATTCATCCACTTTGAGGGGCGGGGTCAACCCCATCTTGTCATTAAATTCCTCTCTCCACATATCGACTTGTCTTCTGTATTCAGTTCTACCACAATCCATTGTGTTTTGGTTCCACCACTCCAAGAGGCTGTTTGA 771 0.4137 MSQSQPPWATKKKRMKEKVRNIRGKEGGRNFHKFYHAYDNYMTYAFPHDELKPLSKTFTNSLSELGNLKLEHLPQDYNGSALTLIESLSSLVIMGNNTEFERAVLWLSENLTFDVDARINLFECNIRVLGGLVSAHLLASDSSKKLFRGAYKNQLLVLAEDLGKRFLPAFNTATGLPYAWINLKLVFSCPPQLLSLDIALPLSCEQAELFIGFIHFEGRGQPHLVIKFLSPHIDLSSVFSSTTIHCVLVPPLQEAV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04610 256 PRINTS Glycosyl hydrolase family 47 signature 118 136 IPR001382 GO:0004571|GO:0005509|GO:0016020
Spst3g04610 256 PRINTS Glycosyl hydrolase family 47 signature 33 53 IPR001382 GO:0004571|GO:0005509|GO:0016020
Spst3g04610 256 PRINTS Glycosyl hydrolase family 47 signature 168 187 IPR001382 GO:0004571|GO:0005509|GO:0016020
Spst3g04610 256 Pfam Glycosyl hydrolase family 47 34 184 IPR001382 GO:0004571|GO:0005509|GO:0016020
Spst3g04610 256 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 11 184 IPR044674 GO:0004571|GO:1904380|GO:1904382
Spst3g04610 256 MobiDBLite consensus disorder prediction 1 22 - -
Spst3g04610 256 Gene3D - 20 190 IPR012341 GO:0005975
Spst3g04610 256 SUPERFAMILY Seven-hairpin glycosidases 33 187 IPR036026 GO:0004571|GO:0005509|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04610 11 184 Glycoside Hydrolase AT1G27520 76.437 1.08e-90 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04610 K10084 - gmx:100793674 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04610 3 97898295 97903634 Spst3g04610 3 97898295 97903634 ECH