Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04605 ATGGGAAATTGCCAAGCCGTTGACACTGCAACTCTAGTGATACAACAACCCAATGGGAAAGTAGAAAGGTTGTATTGGCCTGTGAGTGCTAGTGAAGTGATGAAGACCAACCCTGATCACTATGTTGCTCTTCTTATCTCCACCACATTGTGCTCATCCAAGGACAATGAAATTTGCCAAAATAAGAGTGAAAACACCAACACCACCAACCCTGTTCGCCTTACCCGCATCAAGCTTCTCAAGCCAACAGACACCCTTATGCTTGGCCAAGTTTATAGACTAATCTCGGCTCAAGAGGTTATGAAGGGTCTTTGGGCAAAGAAACAAGCAAAACTGAAGAGAAACGTATCAGAATCAGCACAAAAGCCAAATCTGATGAAGGAAAGGACAGACAAATCAGCAAGGAGGTCTGAGCCGGAGGACAACCAGGAAACCAAAGGTGAAAGACACGGGTCAAGGACAACATCAAGTAATAATGCTTCTAGTGCCACAGCTAAGTCAAGAACATGGCAACCCTCTTTACAAAGCATCTCAGAGTCAGCCAGCTGA 549 0.4499 MGNCQAVDTATLVIQQPNGKVERLYWPVSASEVMKTNPDHYVALLISTTLCSSKDNEICQNKSENTNTTNPVRLTRIKLLKPTDTLMLGQVYRLISAQEVMKGLWAKKQAKLKRNVSESAQKPNLMKERTDKSARRSEPEDNQETKGERHGSRTTSSNNASSATAKSRTWQPSLQSISESAS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04605 182 MobiDBLite consensus disorder prediction 152 182 - -
Spst3g04605 182 MobiDBLite consensus disorder prediction 124 151 - -
Spst3g04605 182 PANTHER EXPRESSED PROTEIN 1 180 - -
Spst3g04605 182 MobiDBLite consensus disorder prediction 113 182 - -
Spst3g04605 182 Pfam PADRE domain 1 179 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04605 Spst-Chr3 97854337 97855445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04605 - - gmx:100306591 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04605 3 97854337 97855445 Spst3g04605 3 97854337 97855445 ECH
Spst3g04605 3 97854337 97855445 Spst9g02256 9 52472882 52474128 PCT