Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04604 ATGCCAGGAGGTGGGGGAGCTCCGGCGCCTAAGATTGATGAGCCACAGCCACATCCACCGAAGGATCAGCTACCGAATGTTTCGTACTGCATTACGAGTCCTCCTCCATGGCCTGAGGCCATTCTTCTTGGATTTCAACATTATCTTGTGATGCTCGGTACAACTGTTCTAATTCCCACTGCTCTAGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAGGCCAAAGTTATTCAAACTGTACTCTTTGTAGCTGGAATTAACACATTGCTGCAAACTCTGTTTGGAACTCGATTGCCTGCAGTAATTGGAGGGTCTTATACTTATGTTGCAACAACCATCTCTATTATTCTTGCTGGTCGTTTCAGTGATGAGCCAGATCCTGTAGAGAGATTCAAAAGGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTTGGCTTTAGTGGTCTCTGGCGTAATGTTGCAAGGTTTTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGCTTTGGGCTTTACGAGCTAGGCTTTCCTGGGGTTGCTAAATGTATAGAGATTGGACTGCCTGAGCTCATATTACTAGTATTTGTTTCACAGTTTGTACCCCATGTTCTTCATGCAGGAAAACATGTCTTCGAACGGTTCACTGTTTTATTTACAGTTGCAATTGTGTGGTTATATGCTTATCTGCTCACCGTTGGAGGGGCATACAATCATGCTGCACCTAAAACACAAGCAACCTGCCGTACTGATCGTGCTGGTTTAGTAGAAGCTGCCCCATGGATACGAGTTCCATATCCATTTCAATGGGGAGCACCTACATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCCCTTGTAGAGTCCAGTGGTGCTTTTATTGCTGTCTATCGGTATGCAAGTGCAACACCATTACCACCATCTATTCTTAGTCGTGGCATCGGTTGGCAGGGAGTTGCCATCTTGTTATCAGGATTGTTTGGAACGGGCAATGGATCCTCTGTATCTGTAGAAAATGCCGGTCTTTTGGCTTTAACCCGTGTAGGCAGTCGAAGGGTGGTGCAAATATCGGCGGGTTTTATGATTTTCTTTTCAATTCTTGGTAAATTTGGAGCTGTTTTTGCATCCATTCCACCTACTATTGTTGCTGCACTGTACTGCTTGTTCTTCGCTTATGTTGGAGCGGGAGGTCTAAGTTTTCTTCAATTCTGCAACCTCAACAGTTTTAGAACAAAGTTTGTATTAGGCTTCTCCATCTTCATTGGCCTGTCTGTTTCACAGTACTTCAACGAGTACACAGCAATTAATGGTTATGGTCCAGTTCACACCAAAGCAAGATGGTTCAATGATATAATCAACGTCCCGTTCCAATCAAAGGCATTCGTTGCGGGTTGTATTGCATATTTCCTTGATAACACAATACATAAGAAGGAAGGTGCTATTCGAAAAGACAGAGGAAAACATTGGTGGGACAAGTACCGCTCCTTCAAGACTGACACACGAAGTTATAGCTATATGAAGTCCTCTTTTGCTATAGAATATTCTAAAACATTTGTTCTATTGCTTTTCATTCTGTAA 1620 0.4352 MPGGGGAPAPKIDEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNEEKAKVIQTVLFVAGINTLLQTLFGTRLPAVIGGSYTYVATTISIILAGRFSDEPDPVERFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCIEIGLPELILLVFVSQFVPHVLHAGKHVFERFTVLFTVAIVWLYAYLLTVGGAYNHAAPKTQATCRTDRAGLVEAAPWIRVPYPFQWGAPTFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVAILLSGLFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPTIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFVLGFSIFIGLSVSQYFNEYTAINGYGPVHTKARWFNDIINVPFQSKAFVAGCIAYFLDNTIHKKEGAIRKDRGKHWWDKYRSFKTDTRSYSYMKSSFAIEYSKTFVLLLFIL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04604 539 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
Spst3g04604 539 NCBIfam purine/pyrimidine permease 41 440 - -
Spst3g04604 539 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 524 - -
Spst3g04604 539 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04604 Spst-Chr3 97840108 97845640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04604 9 527 Organic Solute Cotransporters AT5G49990 79.231 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04604 - - gmx:100791553 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04604 3 97840108 97845640 Spst9g02252 9 52401643 52407120 PCT