Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04601 ATGGGAGGTGACAAACGAAAGAGAGGTCGCAAACCCAAAAACCCCGCCCCCGAAACCCTAGTCCCCTCCCCGTCACCCACCGCCTCCCCCTCCCCTGCCCCCGCCACCTCCACCGGCCCAGCTGCCGCCCCTAACTCCAACGCCACCCCCACCTCAATGGATGACCCCTTCTCCGTCAGCAGCGTCGACCTCATCGACAAGACCGCCTCTACCCACGTCCGCCGCGGCCGTGGCCGCCCCAAGAAGATCCCCACCCAGTCCGACAAGCCTCTCTCTCTAGCCACGGGGCGTCGCGCTACCCGTACCATCGACAATGGCGGCGGAGAGTTATCGGTTCCTGTCGACGTCGGGGTGCCTACCTTGATGGCGATGGAGACGGACCGGGCATGGGAGGCGCGGGTGCTCCCGGCGATGGATTCTGTGGTGAAGGTGTTCTGTGTCCATACGGAACCGAATTTCTCGCTGCCGTGGCAGCGGAAGAGACAGTACAGCTCGAGTAGTAGCGGGTTTGTGATTAGCGGGAGAAGGGTTCTGACGAATGCGCATTCGGTGGAACACTATACACAAGTCAAGCTCAAGAAACGTGGCTCTGATACCAAGTACGTGGCCACTGTTCTTGCCATCGGAACCGAATGTGACATTGCCATGCTTACAGTGGATGATGATGAGTTCTGGCAAGGTATGTCACCTGTAGAGTTTGGGGAATTGCCTGCACTTCAAGATGCGGTTACTGTTGTAGGCTACCCAATTGGTGGAGACACTATCTCTGTGACCAGTGGTGTTGTATCGCGCATTGAGATTCTATCTTATGTTCATGGTTCTACAGAGCTTTTAGGTTTACAGATAGATGCTGCTATAAATTCTGGCAATTCTGGTGGACCTGCATTTAACGGTAAAGGAAACTGTGTGGGGGTTGCATTTCAGTCCCTTAAGCATGAAGATGCGGAGAATATAGGTTATGTCATTCCAACACCAGTTATCATGCATTTCATCCAGGATTATGAGAAGAATGGAGGATATACCGGGTTCCCTATTCTTGGGGTTGAGTGGCAGAAAATGGAAAATCCTGATCTGCGAATGGCAACAGGCATGAAACCTGACCAGAAAGGTGTGCGCATTAGAAGAATTGACCCTACTGCTTCAGAATCTAAGTTTTTGAAGCCATCAGATGTGATCCTTAGTTTTGATGGGATTGATATTGCCAATGATGGAACAGTTCCATTTCGTCATGGGGAGCGCATTGGTTTCAGTTATCTCATCTCACAGAAATACACTGGAGATAATGCAGCAATCAAAGTGCTTCGAAACACAGACATTTTCGAGTATGACATTAAACTCGATAGTCATAGAAGGCTTATTCCATCACACAGCAAGGGCAAGCCTCCGTCATATTATATAATTGCTGGATTTGTTTTCACAACTGTTTCAGTTCCATATCTTCGTTCTGAGTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGCTGCATTCAATGCCACAATCACCGGATGAACAACTTGTCGTGGTCTCTCAGGTGCTTGTGGCTGATATCAACATTGGATATGAAGATATTGTTAACATTCAGGTCCTTGCTTTCAATGGTAAACCAGTGAAAAACCTGAAGAGCTTGGCCACTATGGTAGAGAGCTGCGAAGATGAATATCTAAAATTTGATCTAGATTATGATCAGATAGTGGTGCTTCGCTCAAAGACTGCAAAAGCAGCTACTCTTGATATTCTTGCGACACACTGTATTCCATCAGCTACGTCTGATGATCTGAAGTCTTGA 1806 0.4873 MGGDKRKRGRKPKNPAPETLVPSPSPTASPSPAPATSTGPAAAPNSNATPTSMDDPFSVSSVDLIDKTASTHVRRGRGRPKKIPTQSDKPLSLATGRRATRTIDNGGGELSVPVDVGVPTLMAMETDRAWEARVLPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVISGRRVLTNAHSVEHYTQVKLKKRGSDTKYVATVLAIGTECDIAMLTVDDDEFWQGMSPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNGKGNCVGVAFQSLKHEDAENIGYVIPTPVIMHFIQDYEKNGGYTGFPILGVEWQKMENPDLRMATGMKPDQKGVRIRRIDPTASESKFLKPSDVILSFDGIDIANDGTVPFRHGERIGFSYLISQKYTGDNAAIKVLRNTDIFEYDIKLDSHRRLIPSHSKGKPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQLVVVSQVLVADINIGYEDIVNIQVLAFNGKPVKNLKSLATMVESCEDEYLKFDLDYDQIVVLRSKTAKAATLDILATHCIPSATSDDLKS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04601 601 Gene3D - 120 224 IPR043504 -
Spst3g04601 601 MobiDBLite consensus disorder prediction 17 33 - -
Spst3g04601 601 FunFam Protease Do-like 9 120 224 - -
Spst3g04601 601 Pfam Trypsin-like peptidase domain 168 305 - -
Spst3g04601 601 CDD PDZ_serine_protease 344 436 - -
Spst3g04601 601 PANTHER - 68 599 - -
Spst3g04601 601 SUPERFAMILY PDZ domain-like 369 451 IPR036034 GO:0005515
Spst3g04601 601 FunFam protease Do-like 9 226 336 - -
Spst3g04601 601 Gene3D - 339 451 IPR036034 GO:0005515
Spst3g04601 601 Gene3D - 225 336 IPR043504 -
Spst3g04601 601 MobiDBLite consensus disorder prediction 34 67 - -
Spst3g04601 601 SUPERFAMILY Trypsin-like serine proteases 135 338 IPR009003 -
Spst3g04601 601 Pfam PDZ domain 453 598 IPR041517 -
Spst3g04601 601 PRINTS HtrA/DegQ protease family signature 197 217 IPR001940 GO:0004252|GO:0006508
Spst3g04601 601 PRINTS HtrA/DegQ protease family signature 239 263 IPR001940 GO:0004252|GO:0006508
Spst3g04601 601 PRINTS HtrA/DegQ protease family signature 169 181 IPR001940 GO:0004252|GO:0006508
Spst3g04601 601 PRINTS HtrA/DegQ protease family signature 385 397 IPR001940 GO:0004252|GO:0006508
Spst3g04601 601 PRINTS HtrA/DegQ protease family signature 276 293 IPR001940 GO:0004252|GO:0006508
Spst3g04601 601 MobiDBLite consensus disorder prediction 1 92 - -
Spst3g04601 601 Gene3D - 452 601 IPR046449 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04601 Spst-Chr3 97807035 97811781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04601 K25897 - gmx:100817187 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04601 3 97807035 97811781 Spst3g04601 3 97807035 97811781 ECH