Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04591 ATGCGATCCTCAACCATTCGCTGCTTCACCATCTTCACCCTGTTACTCATCGCCATCCTCCCACATGGACACGCAACAACCTATAAACTTCTCTCTTCTCCTTTTTCAACCGCTCTCGAAACCCTCCAAAAACAACTCGGGTACAACTTCAAGAGCATTGATCTTCTCCGTCGCGCCATGACCCACGCCTCTTTCTCCGAAGAAAACAACAAAGCTTTCGCCATTCTGGGCGCCACTGTCATCGAAACCTCCGTCTCTTTCCATTTGCTCTCCAAAGACATTGATATTTCTCCCAAAGAGCTGAACCGTCGATTATCCCAAATCACCAACGTCGACTCTTCCTGCGCCGTTGACGGAACCCGATTAGGGTTGCACAAGATCGTTCGCGTCTCGCCCAAGACCAATTCGTCCACCCCTGCCGTCGTTTGCGGCGCGTTCCGAGCAATATTCGGTGCCATTTCTATTGACACCGGCAAATCCGATGATGCAGGTAATATTTTCTGGAACCTTCATGGCGGTGACCTAGGAGCTGCTGTCGCCCTTTGA 546 0.5092 MRSSTIRCFTIFTLLLIAILPHGHATTYKLLSSPFSTALETLQKQLGYNFKSIDLLRRAMTHASFSEENNKAFAILGATVIETSVSFHLLSKDIDISPKELNRRLSQITNVDSSCAVDGTRLGLHKIVRVSPKTNSSTPAVVCGAFRAIFGAISIDTGKSDDAGNIFWNLHGGDLGAAVAL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04591 181 Gene3D Ribonuclease III domain 37 174 IPR036389 GO:0004525|GO:0006396
Spst3g04591 181 SUPERFAMILY RNase III domain-like 33 167 IPR036389 GO:0004525|GO:0006396
Spst3g04591 181 ProSiteProfiles Ribonuclease III family domain profile. 39 158 IPR000999 GO:0004525|GO:0006396
Spst3g04591 181 SMART riboneu5 54 180 IPR000999 GO:0004525|GO:0006396
Spst3g04591 181 FunFam Protein NUCLEAR FUSION DEFECTIVE 2 37 173 - -
Spst3g04591 181 CDD RIBOc 54 161 IPR000999 GO:0004525|GO:0006396
Spst3g04591 181 PANTHER RIBONUCLEASE III 32 159 IPR011907 GO:0003723|GO:0004525|GO:0006364
Spst3g04591 181 Pfam Ribonuclease-III-like 54 160 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04591 - - gmx:100527745 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04591 3 97701232 97701922 Spst3g04591 3 97701232 97701922 ECH