Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04583 ATGCTTGTGGCTGAGAGGCAAGTTAAAACCATGGTTAACACCAATGCAGCAAGAACTGCCGTTGGAATAATTGGAAATATCATCTCTTTTGGGTTATTCATGTCTCCAGTACCTACATTTATAGCAATATTTAAGGCAAAATCAGTGCAAAATTTTAAGCCAGATCCTTACATTGCGACTATATTGAATTGTGGAGTGTGGTTATTCTATGGTATGCCCTTTGTAACACCAGATAACACTCTTGTCATCTCAATTAATGCGTTTGGGTTCTTCCTTGAAATCTTCTACAGTCTCGTCTTCTTTATATACTCGAGCTGGGGCAAGAGGAGGAAGATCCTCCTAATCTTCCTTGGTGAAATCATCTTCCTTGCGTTACTGGTGTTTTTAGTGATGACCTTTGTTCACACCCCGAAACAAAGAAAGGTGATTGTTGGACCTATCTGCATAGTCTTCAACATCCTTATGTATTTTGCACCCTTGACTGTCATGAGACAAGTAATTCGAACGAAGAGCGTCAAGTACATGCCTTTCTTACTTTCATTAGCCAACTTCGCCAATGGAATTGTCTGGACGATCTATGCCTTACTTAAGTGGGATCCATTCATTGTGATTCCAAATGGCTTGGGAACACTTTCTGGGTTGACGCAGCTCATCCTGTACGCCATGTACTACCGAACAACCAAGTGGGACGAAGATGATATGTCTAACCCGTGA 714 0.4132 MLVAERQVKTMVNTNAARTAVGIIGNIISFGLFMSPVPTFIAIFKAKSVQNFKPDPYIATILNCGVWLFYGMPFVTPDNTLVISINAFGFFLEIFYSLVFFIYSSWGKRRKILLIFLGEIIFLALLVFLVMTFVHTPKQRKVIVGPICIVFNILMYFAPLTVMRQVIRTKSVKYMPFLLSLANFANGIVWTIYALLKWDPFIVIPNGLGTLSGLTQLILYAMYYRTTKWDEDDMSNP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04583 237 PANTHER RAG1-ACTIVATING PROTEIN 1 23 227 IPR047664 -
Spst3g04583 237 FunFam Bidirectional sugar transporter SWEET 140 233 - -
Spst3g04583 237 Gene3D - 17 109 - -
Spst3g04583 237 Pfam Sugar efflux transporter for intercellular exchange 143 227 IPR004316 GO:0016020
Spst3g04583 237 Pfam Sugar efflux transporter for intercellular exchange 21 104 IPR004316 GO:0016020
Spst3g04583 237 FunFam Bidirectional sugar transporter SWEET 19 109 - -
Spst3g04583 237 Gene3D - 141 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04583 Spst-Chr3 97593138 97595379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04583 11 204 Miscellaneous Gene Families AT5G62850 58.247 8.15e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04583 K15382 - gmx:100810948 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04583 3 97593138 97595379 Spst3g04583 3 97593138 97595379 ECH