Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04570 ATGATGCAGACAGAGCAACCACAGTCTTCTCCAAGTTTCAGCGCTCACTCTTCCGACTCTTTCTCTCACATCGCCACAAGAGTCGTCCACGAACTCCGCAGCGACCCAACCCGCACTCTTTGCCAACAAAACGACAACCCTTACCAAACTGACAATGTTGACGCTGCTGATGATTTCGAGTTCTCCTTCGTTTTCAGACACACAGATTCCTCCCCTGTCTCTGCCGATGACATTTTCTACAACGGCCAAATCAGACCTTTTTACCCTTCTTTCCACCAAAACACGGTCGCTCACTCTTCCGTTACTTCCCTTCCTGTTGAAAACTCTCGTCGTCAACGTCTATCTTTGAAGACGCTGATGTTGGAGGAGCGAGAGACTATAAACAACAACGAGCTCGAAGGCCTGGCTGAAGGAACGTATTGCGTGTGGACCCCACCCTGCAAGAAGAAAAGTTCGTCACCCAAGAGGTGGAGGCTTCGAGACCTTGTGTCGCGGAGTAATAGCAGTGACCAGAAGGACTCTCTCCTCTTAGTGGGTCCCGCCAAGAGGACTAGGAAGGTGGTGCCTAAGCATGCCTCCGCTCACAACTGTGGCACCACCGCGAAGTTGGTGGGGTTTTTCACCAACGCGTCGGAGTGA 639 0.518 MMQTEQPQSSPSFSAHSSDSFSHIATRVVHELRSDPTRTLCQQNDNPYQTDNVDAADDFEFSFVFRHTDSSPVSADDIFYNGQIRPFYPSFHQNTVAHSSVTSLPVENSRRQRLSLKTLMLEERETINNNELEGLAEGTYCVWTPPCKKKSSSPKRWRLRDLVSRSNSSDQKDSLLLVGPAKRTRKVVPKHASAHNCGTTAKLVGFFTNASE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04570 212 Pfam Protein of unknown function (DUF1645) 75 173 IPR012442 -
Spst3g04570 212 PANTHER OS07G0619500 PROTEIN 8 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04570 Spst-Chr3 97453116 97453754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04570 - - var:108339392 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04570 3 97453116 97453754 Spst9g02209 9 49423125 49424095 PCT