Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04551 ATGGAGACCGCGAGCGACACTGGCCTCGAAGCCCTACGGCGGCTGAAAGCGACGGATGCACCGAGATGGCTCGCGCCGAACCCGGAGCTGTCCGAAGCTGCTCGTACGGCGTCCCAATACTTGTTTTCTACCCTCAAACCATTTTGCCCTAAATCGCCATTGGACCAACTCCTCGTGGATGGTTTCGACGCCGAACAGATATGGCAACAAATCGACATCCAATCGCAACCTCTGTTGTCCACCCTTCGCCGCCGCTTGAAGCAGCTGGCCGAAAATCCTGAAGAGATTTCCCGGCTAAAGGTTCCTTCGGCAAACGGGAGCAAGGTGGAAGCAAAGAGTAAAGATGAGTGGGAGGGAGATAGGGACGATTTTGACGAGGAGTTGGACGAGGATGATGAAGATGAAGCAGACGAGGATGAAGCTAAGGAGGGAGAAGAAGGAATGGAACAGGAAGATGAAGATGAAGAGGAAGAGGAAGAAAAAGAGCAAGAGGACGAGGAGAACGAAGAAGGTGGTGGAATTGAGGATAAATTCTTGAAAATAGATGAATTGGCGAAGTACTTAGATAAGGAGGAAGAGGATTTCGAGAATGGTGAGGCAGCCAGAGAAGGCGAGGAGGAAGACGATGACGAGGAAAGTGATGAGGTGACTGATGATGATTTTGGGGTTGGTGACGAAGATGATGAAGCAGACGACATGGAAAATGCAAGGTATGATGACTTCTTTGGTGGTAAAAAGGAAAGGGGCTCAAAAAGAAAAGCTCAGGTACTTCAGGAATCTGAATATTCTGAAGATGAGGATGGCAGAGAATTTATCTTGTGTATATATGCTATTTATCTTCAGCTGGAAAATATTCAATCCAAGATACAGCAGATGGAGAAAGCTAACATAGAGCCAAAAACATGGACTATGCAGGGTGAGGTAACTGCTGCAAAGAGACCCAAGAATAGTGCATTGGAAGTTGATCTAGATTTTGAGCACAATGTGAGGCCTGCTCCTGTAATTACTGAGGAAGTTACAGCTTCAATTGAGGATATGATCAAGAAAAGGATTATTGAGGGATTTTTTAATGATGTGCAAAGGCTGCCTAAATTGCCATCTAAAGCGCCTCGGGAAGTTAAAGAGTTGGATGACAATAAAAGCAAGCAGGGTCTTGCAGAAATTTACGAGCAAGAATATGTTCAGAAGACAGACCCCACTTCTGCTCCATTGTCATTCAAAGATGAACAAAAGAATGAGGTGCAAATCTTGGCTAGCATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTTTCCCATTTTAACTTCGCTCCAAAACCTGTTATTGAGGACATGTCTATTCAAGCTAATGTGCCTGCTCTGGCAATGGAAGAAATTGCTCCTGTTGCTGTTTCAGATGCTGCTATGTTGGCTCCTGAGGAGGTGTTTGACGGCAAGGGTGATATTAAGGAAGAAGTAGAGCTTACACAGGCAGAAAGGAAAAGAAGGAGAGCTAACAAGAAAAGAAAATTTAAAGATGCGGCAGTAAAAAAGACAAAAAAGAAGGCACAAGAAGGTGCAATTCATAGCCAAGCTAATGGTTAA 1587 0.4512 METASDTGLEALRRLKATDAPRWLAPNPELSEAARTASQYLFSTLKPFCPKSPLDQLLVDGFDAEQIWQQIDIQSQPLLSTLRRRLKQLAENPEEISRLKVPSANGSKVEAKSKDEWEGDRDDFDEELDEDDEDEADEDEAKEGEEGMEQEDEDEEEEEEKEQEDEENEEGGGIEDKFLKIDELAKYLDKEEEDFENGEAAREGEEEDDDEESDEVTDDDFGVGDEDDEADDMENARYDDFFGGKKERGSKRKAQVLQESEYSEDEDGREFILCIYAIYLQLENIQSKIQQMEKANIEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDMIKKRIIEGFFNDVQRLPKLPSKAPREVKELDDNKSKQGLAEIYEQEYVQKTDPTSAPLSFKDEQKNEVQILASMLFKRLCLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEEVELTQAERKRRRANKKRKFKDAAVKKTKKKAQEGAIHSQANG 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04551 528 MobiDBLite consensus disorder prediction 236 262 - -
Spst3g04551 528 MobiDBLite consensus disorder prediction 97 262 - -
Spst3g04551 528 PIRSF snoRNP_Mpp10 3 271 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Spst3g04551 528 PIRSF snoRNP_Mpp10 280 527 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Spst3g04551 528 Pfam Mpp10 protein 282 512 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Spst3g04551 528 Pfam Mpp10 protein 50 267 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Spst3g04551 528 MobiDBLite consensus disorder prediction 120 172 - -
Spst3g04551 528 MobiDBLite consensus disorder prediction 489 528 - -
Spst3g04551 528 MobiDBLite consensus disorder prediction 496 511 - -
Spst3g04551 528 Coils Coil 188 208 - -
Spst3g04551 528 MobiDBLite consensus disorder prediction 198 235 - -
Spst3g04551 528 MobiDBLite consensus disorder prediction 173 197 - -
Spst3g04551 528 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 281 518 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Spst3g04551 528 Coils Coil 141 170 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04551 K14559 - gmx:100781093 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04551 3 97175053 97180921 Spst3g04551 3 97175053 97180921 ECH