Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04539 ATGAAGAAAGGAGTAACGTTACTGCGCATAGTAGTCAACGCAATATGTCTGGTTATCGTTTACGGTGCATCGGAGTCTCCACAGTATACAGTGGTTCACTCGGAGTCCGATTTCGAGATCAGGCTCTATAGAACCTCCGTTTGGATGGCCGCTTCTGCTCTCGACATCTCCTTCGAGAAAGCAACCTGGGATGGTTTCCACAGGTTGTTCCAGTTTACAGAAGGAGCCAACCTCAACTTCTCACGAATCCCAATGACCGTTCCCGTCTTGACAACCACTGTCCCTGGAGCCGGTCCCCTCCAGTCCCAAGGCTACTACGTCAGTTTATACTTACCCATTAAGTTCCAAGGAAACCCACCGCTGCCGCTTCCAGAACTCAATATCAGACCCTATGAATTCACCACCCACTGCGTTGCGGTTAGAAAGTTCTCTGGATTCGCCAAGGATGGGCGGATTGTCAAGGAGGCGGAGAAGCTTGCCACCAGCCTCAGTCGCTCTCCCTGGGCTCCCTCCACCACTCGCCGTGGTTACTCAATTGCACAGTACAATACTCCGATCCGAATTGTGAGTCGCAAAAACGAGGTGTGGGTGGACGTCGATGCTCCTGAATTAGGCTGTGAATCGGTTGGTGTTGCCGCGTATTGA 645 0.5178 MKKGVTLLRIVVNAICLVIVYGASESPQYTVVHSESDFEIRLYRTSVWMAASALDISFEKATWDGFHRLFQFTEGANLNFSRIPMTVPVLTTTVPGAGPLQSQGYYVSLYLPIKFQGNPPLPLPELNIRPYEFTTHCVAVRKFSGFAKDGRIVKEAEKLATSLSRSPWAPSTTRRGYSIAQYNTPIRIVSRKNEVWVDVDAPELGCESVGVAAY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04539 214 Pfam SOUL heme-binding protein 25 197 IPR006917 -
Spst3g04539 214 FunFam Heme-binding protein 2 24 205 - -
Spst3g04539 214 SUPERFAMILY Probable bacterial effector-binding domain 15 199 IPR011256 -
Spst3g04539 214 Gene3D Regulatory factor, effector binding domain 24 204 IPR011256 -
Spst3g04539 214 PANTHER HEME-BINDING PROTEIN-RELATED 23 200 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04539 Spst-Chr3 97081808 97082515 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04539 - - gmx:100306073 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04539 3 97081808 97082515 Spst3g04539 3 97081808 97082515 ECH