Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04507 ATGAATCGTTTTAAGGCAATCGTTGCTAACTTCAAATTCCTCGAGTCGACACTTGCCAGTAGACTCATTGCAACTCAGTCTCTCGTACTCACTTATAACCAGGTGACTCATTTCTCTCTCTACACTCCATCTCCCTTTTTGAATCAACCTCACGATTTCCACTTTCCCAACATTCATCGAAAGCTCTACTACTGTTCTTCAAAACCAAATCCCATTGTCGAGCTAATTTTGACCAGCAATTGGTCCAAGGGGTTAAAGCACAAGTTAGAAAAATGCTACCCATCCCTCACCCATGAAACTGTTGTTTACGTTTTGAAGCGGTTGGAAGCAAGCCCAGAAAAAACATGCTGCTTTTTCGATTGGGTCAGTACTAAAAAATGGTTTAGAGCAAGTTCGTCACTGTATAGCTTAATTCTTAGAGTCTTAGCCACTAAGGAGACGATAAAACAATTTTGGATTACTCTATGGACTATGAAGAGAAAAGGGTTTTATTTTGATGAAGAGACCTATTTTCCAATTTTAGCCGATTTTAAAAGGAAAAAGATGGACAATGATTGCTCGTCTCTTATCCACTTTTATAGTCGGAGTAACTGGGAAAATTCAATGCGAAGTGTTGTCACTAATGTGGTTGACATTATTTCAGAGTCTAATTGGGGTGATGGTGTTAGGCGTGAACTTGCAAAGGTTAAAATTCAGCTGTCAGATAATTTTGTAATAAATGTTTTGAGAGAGCTTCGAAATTCTCCTTTAAAGGCTTACAAGTTCTTTTACTGGGTTGGGAGGCAATCTGGGTATGAGCAAAATATAGTGACTTATAATGCAGTTGCAAGAGTTCTCGCGAGGACAGACTCGATTGAAAAGTTTTGGAGTGTCATTAAGGAGATGAAGAGTGTTGGTCATGAATTGGATATTGATACTTACATAAAGATATTAAGGATGCTTTAA 945 0.382 MNRFKAIVANFKFLESTLASRLIATQSLVLTYNQVTHFSLYTPSPFLNQPHDFHFPNIHRKLYYCSSKPNPIVELILTSNWSKGLKHKLEKCYPSLTHETVVYVLKRLEASPEKTCCFFDWVSTKKWFRASSSLYSLILRVLATKETIKQFWITLWTMKRKGFYFDEETYFPILADFKRKKMDNDCSSLIHFYSRSNWENSMRSVVTNVVDIISESNWGDGVRRELAKVKIQLSDNFVINVLRELRNSPLKAYKFFYWVGRQSGYEQNIVTYNAVARVLARTDSIEKFWSVIKEMKSVGHELDIDTYIKILRML 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04507 314 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 268 302 IPR002885 -
Spst3g04507 314 NCBIfam pentatricopeptide repeat 270 303 IPR002885 -
Spst3g04507 314 Gene3D Tetratricopeptide repeat domain 220 314 IPR011990 GO:0005515
Spst3g04507 314 PANTHER OS01G0970900 PROTEIN 76 313 IPR044578 GO:0008380
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04507 Spst-Chr3 96722815 96723759 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04507 - - vum:124838645 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04507 3 96722815 96723759 Spst3g04507 3 96722815 96723759 ECH