Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04470 ATGTTACCTCCTATTCCTATTCCTATTCCTATTGATATCAATGCTATAAAAGATAAGTTCTCCTATCAGTTGCGACCTTGGCAACGTTCCTTCCAATTCTGGGTCCGAGCCATTGACATCTACACCGGATACAAGGTGTTTCAAGTGAGAGTCAATTTCGTCAAAGATGTGCAGAAGCAGGAAGCAATGTGGGAACGGCAGCACGAGCTTGCTGCCGATAAGATTTTCGCCTTGTGCTCTGACCTTGGAGGTTTCTTCCTCAAGATCGCTCAAATTATAGGGAAGCCTGATTTGGCCCCGGCTGCATGGGTGAAAAGGCTTGTTACGCTGTGTGATAGGGCTCCTCCGACCCCTTTTGATGTGATGAAACTAGTTTTGGAGAATGAGCTAGGGCAGGATATTGATGATGTGTTCGAGAGATTCGATGTTGAACCCCTAGGTTCTGCTTCAATTGCTCAGGTTCATAGAGCAAGACTGAAAGGTGATACAGGTGATGTTGCTGTCAAGGTTCAACATCCTGGAATTCAGGATCTGATGATGACAGATATCCATAACTTACAAGCGTTTGCACTGTACATGCAAAAGACAGACATCAAATTTGATCTATATTCAGTGACTAAGGAGATGGAAAAACAGATTGGATATGAATTTGACTTCATAAGGGAGGCTGATGCAATGCAAAGGATAAGAAAGTTCTTGTATGAGAATAACAAAAAGACTCCTGTTTTGGTGCCACGAGTAATACGAGATATGGTTACCAGGAGGGTCCTTGTTATGGAATATATTGATGGTGTTCCAATAATGAACCTTGGTGATGAAATAGCAAAGAGAGGGATAAATCCTCGTGGTAAGGTTGCAGCAGCAGCAAAGCAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGCCAAATGATTTTGAAAAGTGGATTCTTCCATGCAGATCCTCATCCAGGAAACATCCTGATTTGTAAAGGATCTGAGGTTGCCTTGCTAGACTACGGGCAGGTGAAGGATCTCCCAGAACAGTTGAGGCTTGGCTATGCTAATCTAGTTCTTTCAATTGCTAATGGTGACCCATTAAGAGCTGCAGAGAGCTATAGAGAGCTTGGTATAGAAACCGTGAGCAGTTGTGAAAATGAGCTACAAGAATTATTTAAACTAGCACAGACAATGTTTGATACAAAATTGCCTCCTGGGGTGGTAATGCTGCAACCTTTCTCAGAGGAATCTTCAATTAAAAAAGTTGCTGTTCAGTCCTTTCCAGAAGAACTGTTTTCTGTACTTCGGACAGTGCATCTACTGAGGGGACTTAGCGTTGGACTTGGAATCAATTATTCTTGTGCAGAACAGTGGAGGCCCTTTGCAGAAGAAGCTCTGTCCCAAGCTGGCAGATTAAAAGCTAAGAATGTTAAGCCCAGAGACAGGTAA 1428 0.4279 MLPPIPIPIPIDINAIKDKFSYQLRPWQRSFQFWVRAIDIYTGYKVFQVRVNFVKDVQKQEAMWERQHELAADKIFALCSDLGGFFLKIAQIIGKPDLAPAAWVKRLVTLCDRAPPTPFDVMKLVLENELGQDIDDVFERFDVEPLGSASIAQVHRARLKGDTGDVAVKVQHPGIQDLMMTDIHNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFIREADAMQRIRKFLYENNKKTPVLVPRVIRDMVTRRVLVMEYIDGVPIMNLGDEIAKRGINPRGKVAAAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEQLRLGYANLVLSIANGDPLRAAESYRELGIETVSSCENELQELFKLAQTMFDTKLPPGVVMLQPFSEESSIKKVAVQSFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPFAEEALSQAGRLKAKNVKPRDR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04470 475 CDD ABC1_ADCK3-like 110 365 - -
Spst3g04470 475 Pfam ABC1 atypical kinase-like domain 110 364 IPR004147 -
Spst3g04470 475 Gene3D Transferase(Phosphotransferase) domain 1 135 350 - -
Spst3g04470 475 PANTHER ABC1 FAMILY PROTEIN 26 460 - -
Spst3g04470 475 SMART serkin_6 140 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04470 475 SUPERFAMILY Protein kinase-like (PK-like) 112 336 IPR011009 -
Spst3g04470 475 ProSiteProfiles Protein kinase domain profile. 140 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04470 Spst-Chr3 96290390 96297549 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04470 K08869 - gmx:100813009 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04470 3 96290390 96297549 Spst3g04470 3 96290390 96297549 ECH