Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04468 ATGGAAGCTGTGTGTGGAACCGCCGGTGTTTGTGTCACATCATCTCTTCCACGCTCACCAACACTTTTCAAAACCACTATTCCTCTATCACGAGTCAGTTACCAACACCTCACACCATTTCCTTCACAATCTCATCTATTCTCATACCACACCCCACCCTATGCCAGAACCCTCCGCGCCAGAACCACCGTCAAACCCGCAATTTTCCTTCCCCACTTAATTGCTTCTCTGCAACAAGTTGACCAGACTTACATAATGGTGAAGCCTGACGGCGTGCAGCGTGGACTCGTGGGAGAAATTATTTCTAGGTTTGAGAAGAAGGGGTTTAAGTTGACTGGCTTGAAGCTCTTCCAGTGCTCTAAAGAATTAGCTGAGGGTGCAGGTGCATGCCAGAAGGAGAACCTTCATCGGAGAGCACACAATGGGAGAGGGGCCAAACTATATTTTGCTAGAGTCAATCTGGAAAAGGACAGTAATGTTGATTCTATTGAGCATTACAAGGACCTAAAGCAAAAGTCATTCTTCCCCAAGCTCATTGACTATATTACTTCTGGTCCTGTTGTGTGCATGGCTTGGGAGGGTGTTGGAGTAGTGGCATCCGCACGGAAACTTATAGGGGCTACAGATCCTCTTCAAGCTGAACCAGGCACAATAAGAGGAGACCTTGCCGTTCAAACAGGAAGGAATGTTGTTCATGGCAGTGACAGCCCCGAGAATGGAAAGCGTGAAATAGCTCTATGGTTCAAGGAAGGCGAATTATGCGAATGGACTCCTGTTCAAGCACCATGGCTGAGAGAATAA 801 0.4732 MEAVCGTAGVCVTSSLPRSPTLFKTTIPLSRVSYQHLTPFPSQSHLFSYHTPPYARTLRARTTVKPAIFLPHLIASLQQVDQTYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAEGAGACQKENLHRRAHNGRGAKLYFARVNLEKDSNVDSIEHYKDLKQKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIALWFKEGELCEWTPVQAPWLRE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04468 266 FunFam Nucleoside diphosphate kinase 129 262 - -
Spst3g04468 266 CDD NDPk_I 82 248 - -
Spst3g04468 266 Hamap Nucleoside diphosphate kinase [ndk]. 80 253 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Spst3g04468 266 Pfam Nucleoside diphosphate kinase 159 252 IPR034907 -
Spst3g04468 266 Pfam Nucleoside diphosphate kinase 82 125 IPR034907 -
Spst3g04468 266 Gene3D - 76 266 IPR036850 -
Spst3g04468 266 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 75 265 - -
Spst3g04468 266 SMART ndk_5 80 255 IPR034907 -
Spst3g04468 266 ProSitePatterns Nucleoside diphosphate kinases active site. 229 237 IPR023005 -
Spst3g04468 266 SUPERFAMILY Nucleoside diphosphate kinase, NDK 80 265 IPR036850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04468 Spst-Chr3 96283404 96287347 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04468 K00940 - gmx:100500478 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04468 3 96283404 96287347 Spst3g04468 3 96283404 96287347 ECH