Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04449 ATGGCGAACACTAACTTGGAAGATGTTCCCTCTCTGGATCTCATGACTGAGCTCCTTCGTCGCTTCAAGTGCTCCTCCAAACCTGACAAGCGCCTTATTCTCGTTGGCCCACCTGGATCTGGAAAAGGTACCCAGTCGCCAATAATAAAGGATGAGTACTGCTTATGCCACCTAGCTACTGGTGATATGTTACGAGCAGCTGTTGCAGCCAAGACTCCTCTTGGTGTCAAGGCTAAAGAAGCTATGGATAAGGGAGAACTTGTTTCTGATGACTTGGTTGTTGGGATTATAGATGAAGCAATGAAAAAACCATCATGTCAGAAAGGTTTCATTCTTGATGGTTTCCCAAGAACTGTGGTCCAAGCACAAAAGCTTGATGAGATGCTGGATAAACAGGGAGTGAAAGTTGATAAGGTGCTCAATTTTGCAATTGACGATGCAATCCTTGAGGAGCGAATTACTGGTCGCTGGATACACCCATCCAGTGGCAGAACATACCACACAAAATTTGCCCCTCCTAAGGTTGCTGGCATTGATGATGTTACTGGTGAACCACTTATTCAGCGCAAGGATGACACTGCAGCTGTTCTCAAGTCGAGACTGGAGGCATTTCATAAGCAGACCGAACCGGTTATTGATTACTATTCGAAGAAGGGCATTGTTGCTAATCTTCATGCTGAGAAACCACCAAAAGAGGTGACAATTGAAGTGGAGAAAGTGCTGTCTTAA 729 0.4513 MANTNLEDVPSLDLMTELLRRFKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLDKQGVKVDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVAGIDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVANLHAEKPPKEVTIEVEKVLS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04449 242 PANTHER NUCLEOTIDE KINASE 8 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst3g04449 242 FunFam Adenylate kinase mitochondrial 30 242 - -
Spst3g04449 242 Pfam Adenylate kinase 34 219 - -
Spst3g04449 242 CDD ADK 31 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst3g04449 242 ProSitePatterns Adenylate kinase signature. 110 121 IPR033690 -
Spst3g04449 242 NCBIfam adenylate kinase 31 241 IPR006259 GO:0004017|GO:0005524|GO:0016776
Spst3g04449 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 236 IPR027417 -
Spst3g04449 242 Hamap Adenylate kinase [adk]. 30 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst3g04449 242 Gene3D - 2 242 IPR027417 -
Spst3g04449 242 PRINTS Adenylate kinase signature 61 75 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst3g04449 242 PRINTS Adenylate kinase signature 110 126 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst3g04449 242 PRINTS Adenylate kinase signature 189 204 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst3g04449 242 PRINTS Adenylate kinase signature 206 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst3g04449 242 PRINTS Adenylate kinase signature 33 46 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst3g04449 242 Pfam Adenylate kinase, active site lid 156 191 IPR007862 GO:0004017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04449 Spst-Chr3 96017473 96021150 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04449 K00939 - gmx:100791848 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04449 3 96017473 96021150 Spst3g04449 3 96017473 96021150 ECH