Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04335 ATGGATAATCACAAACCGTTGTTACCCACATCCTCTCACGCAGCTCCAAACCCATGCACTCGCAAAGACCTTCTTCTGGTCGTTTGTGGCTTCCTCTTGCTCTCTTCCCTTGTCGCCTTTGGGGGGTACAGGGCCTCCAACGTGCCTCATGCTCACGTCTCATCGCCATCATCCAACCATGAGCAAGAACAACGCAGTCCCACATCAGTGCCCTCTCAGAAATGGTACCCTGTTTCAAGGGGTGTTTCTTCCGGAGTGTCGGAGAAGTCATCGAGCGTGTTATTGGCCGGCGAAGGAGGAGCTTCAGAGGCATTTCCTTGGGACAATAGCATGTTGTCGTGGCAGAGAACTTCTTTTCATTTCCAGCCAGAGAAAAACTGGATGAACGGTCCTATGTATTACAAGGGATGGTATCACTTTTTCTACCAGTACAATCCGAACGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCTGTGTCCAGGGACATGATCCATTGGCTTCACCTTCCATTGGCAATGGTGGCTGATCAATGGTATGACATGCAAGGTGTGTGGACAGGCTCAGCCACCATCTTACCTAATGGTGAAATCATCATGTTATACACAGGTTCCACCAACGAGTCAGTGCAAGTTCAAAACCTTGCATACCCTGCTGACCCCTCTGACCCTCTCCTTGTGGATTGGATCAAACACCCTGGGAACCCAGTTTTGGTCCCACCACCAGGCATCGGTGCTAAGGACTTTCGTGATCCTACAACTGCATGGCTCACCTCCCAAGGAAAGTGGCGCATCACCATAGGATCCAAGCTTAACAAAACTGGCATTGCCTTGGTTTATGACACTGAGGACTTCAAGACCTATGAGCTTAAGAAGGGGTTGCTTCGTGCTGTCCCTGGCACCGGCATGTGGGAGTGTGTGGACTTCTTCCCTGTATCCAGAAAAAATGAGAAAGGATTGAATACCTCTATTAATGGGGCTGAGGTGAAGCATGTCATGAAGGTGAGCTTGGATGATGATAGACATGATTACTATACCATTGGGACTTATGACGAGAGCAAGGTTTTGTTCACACCAGATGATGTTAAGAATGATGTTGGTGTTGGTTTAAGGTATGACTATGGACTATTCTATGCATCCAAGACATTTTATGATCAGAATAAGGATAGGAGAATTTTGTGGGGTTGGATTGGAGAGTCTGACAGTGAATATGCAGATGTCGCTAAAGGCTGGGCTTCAGTTCAGAGTATTCCAAGAACTGTGAAGCTTGATAAGAAGACTGGCAGCAACTTACTTCAGTGGCCCGTTGCTGAGGTAGAGAGTTTGAGATTGAGAAGTGATGAATTCAAAAATTTGAAGGCTAAACCAGGGTCAGTGGTGTCAGCAGATATTGAAACAGCCACACAGTTGGACGTTGTTGCGGAGTTTGAGATAGACACGGAATCCCTAGAGAAAACAGCTCAATCCAAAGAAGAGTTCACATGCAGCACCAGTGGTGGGGCTGCACAACGTGGTGCTTTAGGACCTTTTGGTCTTCTGGTTTTGGCAGATGAGGGACTTTCTGAGTATACTCCTGTGTACTTCTATGTCATTAAAGGAAGCAATGGAAATCTTAAGACTTCCTTTTGCTCTGATCAATCAAGGTCATCTCAGGCAAATGATGTTCGCAAGCAAATCTTTGGGAGCGTTGTTCCAGTACTTAAAGGCGAAAAGTTTTCCTTACGGATTCTGGTGGACCATTCTGTTGTTGAAAGCTTTGCTCAAGGTGGAAGAACGTGTGTGACATCACGGGTTTATCCAACAAAGGCAATCTATGGAGCTGCTAGATTGTTCTTGTTCAACAATGCTACTGAGGCCACTGTGACAGCCTCACTCAAAGTTTGGCAAATGAATTCTGCATTTATACGCCCATTCCCATTCCACCCAGATCAGAAGATTTAA 1941 0.4657 MDNHKPLLPTSSHAAPNPCTRKDLLLVVCGFLLLSSLVAFGGYRASNVPHAHVSSPSSNHEQEQRSPTSVPSQKWYPVSRGVSSGVSEKSSSVLLAGEGGASEAFPWDNSMLSWQRTSFHFQPEKNWMNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDMQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKHPGNPVLVPPPGIGAKDFRDPTTAWLTSQGKWRITIGSKLNKTGIALVYDTEDFKTYELKKGLLRAVPGTGMWECVDFFPVSRKNEKGLNTSINGAEVKHVMKVSLDDDRHDYYTIGTYDESKVLFTPDDVKNDVGVGLRYDYGLFYASKTFYDQNKDRRILWGWIGESDSEYADVAKGWASVQSIPRTVKLDKKTGSNLLQWPVAEVESLRLRSDEFKNLKAKPGSVVSADIETATQLDVVAEFEIDTESLEKTAQSKEEFTCSTSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGSNGNLKTSFCSDQSRSSQANDVRKQIFGSVVPVLKGEKFSLRILVDHSVVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFPFHPDQKI 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04335 646 Gene3D - 447 630 - -
Spst3g04335 646 SMART glyco_32 120 590 IPR001362 GO:0004553|GO:0005975
Spst3g04335 646 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 124 447 - -
Spst3g04335 646 MobiDBLite consensus disorder prediction 51 85 - -
Spst3g04335 646 Pfam Glycosyl hydrolases family 32 C terminal 438 629 IPR013189 -
Spst3g04335 646 CDD GH32_Fruct1-like 126 423 - -
Spst3g04335 646 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 447 630 - -
Spst3g04335 646 Pfam Glycosyl hydrolases family 32 N-terminal domain 120 435 IPR013148 -
Spst3g04335 646 SUPERFAMILY Arabinanase/levansucrase/invertase 113 436 IPR023296 -
Spst3g04335 646 Pfam Beta-fructofuranosidase, N-terminal domain 4 112 IPR021792 GO:0004564
Spst3g04335 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 435 634 IPR013320 -
Spst3g04335 646 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 109 633 - -
Spst3g04335 646 Gene3D Glycosyl hydrolase domain; family 43 124 446 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04335 Spst-Chr3 94956937 94960641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04335 79 638 Glycoside Hydrolase AT1G12240 69.110 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04335 K01193 - gmx:100788844 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04335 3 94956937 94960641 Spst3g04335 3 94956937 94960641 ECH
Spst3g04335 3 94956937 94960641 Spst3g04335 3 94956937 94960641 PCT