Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04328 ATGGACATTAAGATTGTTTTCCCACTCATCGTCGTCAACTGCCACCCTGTCTCTCTTCCCTTCCGCTTCTTTCAAACTTCCCCGCGATATATTGCCGATATTTTGACGCCCCTATCCACTCGCGAAAACTCCCCCTCCCTCAAATCAAGAAAGAGTGAGAGGGAGAGAGAAGGTTTGAAAATGCGTGTGAAGGAAATGCACCCCTTGTGCTGTATCTCGCTGGAGAGTCCGGGGATCGGGAGCGACTCGCCTGAGCCAGACGCAGCTGCGCTCTCGAGGACAAGGAGTCTCCCGGCCGGTGGATCTGATGGCATTGCTCGGCGGGGATCGGAGGTCACGGTGGCCGGAGTTCTCTACAAGTGGACCAATTACGGCAAGGGATGGAGATCCCGCTGGTTCCTCCTCCGCAATGGCGTCCTCTCTTATGCCAAGATCCCGTGGCCGGAAAATCTCAACCTCCTCTCTCCGGTAGAAGGTGTGCGCCTTATCGGAGAAGTCACCGCCAACCGCCTCGCCAGAGACGCAGTCACTGTGCGTCGGAAGAATCACAAACCTCCTTCCTCGTCTTCCTCTGCCGTAGTCCATCTCAAGTGTAAAAAGGGTAGAAGAAACCCTGAAAGAGGCTTTGATGCCCGAGCAATAACACGGAAACCCGCTGGTTTCAACCAAATATTTGAAATTGAAGTTATCTTGTACGAATTTAAGCAGATCTCATCGTTCAGAGAGAGCAAGTCAGACGATAGACGGTTCTATATATTCACAGCAACGAAGACTCTCCATCTGAGAACTGATTCGAGGAAGGACCGTGTGGCGTGGATTCAAGCTTTGGTTTCAACCAGAGAATTGTATCCACTTCGACCACTCAGCGACCGTCTCTCCCTTGTACCGAATCATATATCTGTATCAACTGAGAGGCTTAAGAAACACTTACTTGAAGAGGGTAGCAGTGAAAGCCTTGTTAAGGAATGTGAGCAAATCATGTTTGCCGAGTTCTCCGAATTACAAGAGCAACTTCAGATCCTATGTCAAGAACGAAGGAATTTGCTTGATACAATAAGGCAACTGGAGGCTGCTAATATTGAACCTGAGGCCTCTGCCTTGCATGACAGTGAATACCAATTAACAAAGAATGGATTTTCAAGTTTAGGACGTGGAAAATATAGCGAATGCAGTACTACTGAATCATCGGATGATATTGAGAAACAGGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGATACTAAAGAATATTTTACAGAACTTGGTTTTAGATGTGCGTCAACAGGAGGTTTGAATCCAATGAACATGTCTGGAGAAGTTAACACACAGTGCATTGATTTTGAAAGCAATCTTGTTGGGAATACTGTCAATGATTTTGGGTACCCTTCCATAGCAAGGCGAAAGAAGCTTCCAGATCCCGTTGAGAAAGAGAAAGGTGTTAGTCTTTGGTCAATTATCAAAGACAATGTGGGCAAAGATCTCACACGAGTGTGTCTTCCTGTATACTTTAATGAGCCAATATCATCTCTTCAGAAATGTTTCGAGGACTTGGAGTACTCTTTTCTTCTGGATAGAGCTTATGAGTACGGAAAATCGGGAAATGGTCTCCTTCGGGCTCTAAACGTTGCTGCCTTTGCCGTTTCTGGATATGCTTCATCCGAAGGTCGTCATTGTAAACCCTTTAATCCATTGTTAGGGGAAACTTACGAAGCCGATTATCCTGACAAAGGAGTTCGCTTCTTTTCTGAGAAGGTGAGTCACCATCCTACTGTCGTTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGTAACATTCGATCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTAGAGTTTGATGATGGTGAAATATTTCAGTGGAGCAAGGTTACGACAACAATTTATAATCTTATCCTTGGGAAAATATATTGTGATCATCATGGAAACATGGACATTCGTGGTAATCGCCAATATTCGTGCAGACTCAAGTTCAAAGAACAGGCAATTCTTGATCGAAATCCTCACCAGGTGCATGGCTTTGTTGAAGATATAACGGGAAAAAAGGTCGCAACATTATTTGGCAAGTGGGATGACAGCATGTATTATGTTAATGGTGAAGTGAATGTGAAGCCAAAAGATTGCACTTTGTCAGACTCAAACCTGTTGTGGAAAAGGACTAAGCCACCTTCTAATCTCACCCGGTACAATTTGACATCATTTGCCCTCACACTAAATGAGCTTACTCCCGGGCTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCAGATCAGCGGCATCTAGAGAATGGGGAATACGAGAAGGCTAATATGGAAAAACAAAGGCTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGTTGGCAGCCTAGGTGGTTCCACAGAGAAGGTGAAAACGGAACGTTTCGATATATTGGCGGGTATTGGGAAGCGAGATCTCTAGGAAGATGGACTGGATGCCCAAATATCTTCGGTGAGGTTTATGAAGGCAATTTTGATCCTTTAGACAATGATAATGACAGCAAAATATTGTGTGGAGGGTTTCTCTTGAACCTTCTTGCATGGCAGCAACTAGTTTTACTGAATCGAAGGGAGAGTATCCTTTTGGAACCTCAGGAAACTAGACTCCTTGCAGTTCTGGTTGGGCAGCATTACACGAACACAGCTTTCCGCAGAGATGAGAATATATTTGAGGCTGTTTCTTCATCTAGTTGA 2793 0.4518 MDIKIVFPLIVVNCHPVSLPFRFFQTSPRYIADILTPLSTRENSPSLKSRKSEREREGLKMRVKEMHPLCCISLESPGIGSDSPEPDAAALSRTRSLPAGGSDGIARRGSEVTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIPWPENLNLLSPVEGVRLIGEVTANRLARDAVTVRRKNHKPPSSSSSAVVHLKCKKGRRNPERGFDARAITRKPAGFNQIFEIEVILYEFKQISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRELYPLRPLSDRLSLVPNHISVSTERLKKHLLEEGSSESLVKECEQIMFAEFSELQEQLQILCQERRNLLDTIRQLEAANIEPEASALHDSEYQLTKNGFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTKEYFTELGFRCASTGGLNPMNMSGEVNTQCIDFESNLVGNTVNDFGYPSIARRKKLPDPVEKEKGVSLWSIIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSFLLDRAYEYGKSGNGLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDKGVRFFSEKVSHHPTVVACHCEGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQAILDRNPHQVHGFVEDITGKKVATLFGKWDDSMYYVNGEVNVKPKDCTLSDSNLLWKRTKPPSNLTRYNLTSFALTLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWQPRWFHREGENGTFRYIGGYWEARSLGRWTGCPNIFGEVYEGNFDPLDNDNDSKILCGGFLLNLLAWQQLVLLNRRESILLEPQETRLLAVLVGQHYTNTAFRRDENIFEAVSSSS 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04328 930 Gene3D - 107 281 IPR011993 -
Spst3g04328 930 Pfam Pleckstrin homology domain 116 276 - -
Spst3g04328 930 SUPERFAMILY Oxysterol-binding protein-like 480 860 IPR037239 -
Spst3g04328 930 SUPERFAMILY PH domain-like 105 277 - -
Spst3g04328 930 FunFam Oxysterol-binding protein-related protein 2A 781 852 - -
Spst3g04328 930 MobiDBLite consensus disorder prediction 76 96 - -
Spst3g04328 930 FunFam oxysterol-binding protein-related protein 1D isoform X1 571 742 - -
Spst3g04328 930 Coils Coil 782 811 - -
Spst3g04328 930 Coils Coil 331 358 - -
Spst3g04328 930 SMART PH_update 112 283 IPR001849 -
Spst3g04328 930 Pfam Oxysterol-binding protein 485 838 IPR000648 GO:0008289
Spst3g04328 930 Gene3D - 571 742 - -
Spst3g04328 930 Gene3D - 781 837 - -
Spst3g04328 930 ProSiteProfiles PH domain profile. 111 281 IPR001849 -
Spst3g04328 930 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 113 838 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04328 Spst-Chr3 94868782 94882757 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04328 K20456 - gmx:100793692 1439.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04328 3 94868782 94882757 Spst3g04328 3 94868782 94882757 ECH