Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04324 ATGGCTTCCAAAACTCACTCTTCCCTTGCTCTTTTCCTCACACTCAACATCCTCTTCTTCGCCCTTGTCTCTGCTTGTGGCACATGCCCTGGCACAAACCCAAACCCAAACCCAAGGCCAAAGCATAAGCCTGTCAAACCAAGCCCTTCAGGTGGATATGGTGGTCGAGGTGGTTCGGGAGGCTCTGGTGGTTCCGGTGGCTCAGGTGGTTCCGGTGGATCTGGTGGTTCAGGAGGCTCTGGTGGTTCTGGTGCCTCATGCCCCCGTGATGCACTGAAACTAGGTGTATGCGCCAATGTGCTAAACGGGTTGGTGAACGCCACTTTGGGTCAACCACCAGTTACCCCTTGCTGCTCCCTTCTGGATGGCCTCGTCGATCTTGAGGCTGCAGTGTGTCTCTGCACTGCCCTTAGAGCAAACATTTTGGGCATCAATCTCAACCTTCCCATCTCACTCTCCTTGCTTCTCAACGTTTGCTCAAAACAGGCCCCACGTGATTTCCAGTGTGCCTAA 513 0.54 MASKTHSSLALFLTLNILFFALVSACGTCPGTNPNPNPRPKHKPVKPSPSGGYGGRGGSGGSGGSGGSGGSGGSGGSGGSGGSGASCPRDALKLGVCANVLNGLVNATLGQPPVTPCCSLLDGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSKQAPRDFQCA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04324 170 CDD HPS_like 85 169 IPR027923 -
Spst3g04324 170 FunFam pEARLI1-like lipid transfer protein 1 85 170 - -
Spst3g04324 170 Gene3D - 85 170 IPR036312 -
Spst3g04324 170 SMART aai_6 87 169 IPR016140 -
Spst3g04324 170 MobiDBLite consensus disorder prediction 32 81 - -
Spst3g04324 170 MobiDBLite consensus disorder prediction 64 81 - -
Spst3g04324 170 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 89 169 IPR036312 -
Spst3g04324 170 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Spst3g04324 170 Pfam Hydrophobic seed protein 87 170 IPR027923 -
Spst3g04324 170 PANTHER - 7 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04324 Spst-Chr3 94837011 94837523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04324 86 169 Acyl Lipid Metabolism Gene Families AT4G22490 39.286 5.19e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04324 - - gmx:100798361 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04324 3 94837011 94837523 Spst3g04324 3 94837011 94837523 ECH