Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04322 ATGGCTTCCAAAACTCACTCTTCCCTTGCTCTTTTCCTCACACTCAACATCCTCTTCTTTGCCCTTGTCTCTTCTTGCAGCACATGCCCTGGCACAAAGCCAACCCCCAGCCCTTCAGGTGGCTATGGTGGTCGCGGTGGTTCGGGAGGCTCTGGTGGTTCTGGTAGTTCCGGTGGCTCAGGTGGTTCCGGTGGCTCAGGTGGTTCCGGTGGCTCAGGTGGTTCCGGTGGTTCTGGTGGTTCGGGTGGATCTGGTGGTTCAGGAGGCTCTGGTGGTTCTGGTGCCTCATGCCCCCGTGACGCACTGAAACTGGGTGTATGCGCCAATGTGCTAAACGGGTTGGTGAATGTTACTTTGGGTCAACCACCAGTTACCCCTTGCTGCTCCCTTCTCCAGGGTCTCGTTGATCTTGAGGCTGCAGTGTGTCTCTGCACTGCCCTTAGAGCAAACATTTTGGGCATCAACCTCAACCTTCCCATTTCACTTTCCTTGCTTCTCAACGTTTGCTCTAGACAAGCCCCACGTAATTTCCAGTGTGCCTGA 543 0.5506 MASKTHSSLALFLTLNILFFALVSSCSTCPGTKPTPSPSGGYGGRGGSGGSGGSGSSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGASCPRDALKLGVCANVLNGLVNVTLGQPPVTPCCSLLQGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSRQAPRNFQCA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04322 180 Gene3D - 95 180 IPR036312 -
Spst3g04322 180 CDD HPS_like 95 179 IPR027923 -
Spst3g04322 180 Pfam Hydrophobic seed protein 97 180 IPR027923 -
Spst3g04322 180 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Spst3g04322 180 PANTHER - 7 179 - -
Spst3g04322 180 SMART aai_6 97 179 IPR016140 -
Spst3g04322 180 FunFam pEARLI1-like lipid transfer protein 1 95 180 - -
Spst3g04322 180 MobiDBLite consensus disorder prediction 50 91 - -
Spst3g04322 180 MobiDBLite consensus disorder prediction 31 91 - -
Spst3g04322 180 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 99 179 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04322 Spst-Chr3 94816099 94816641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04322 96 179 Acyl Lipid Metabolism Gene Families AT4G22490 43.023 1.62e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04322 - - gmx:100798361 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04322 3 94816099 94816641 Spst3g04322 3 94816099 94816641 ECH