Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04318 ATGGCTTCCAAGGGTGCTCTTATCTTGTGTCTCAACATCATCCTTTTCACTGTGGTTAGCTCCACATATGTGCCATGCAACCCACCCCCCAAAGTTCCCAAACACCCACCTGTCCCAAAGCCACCTTCCACAAAGTATGGTAGTTGCCCTGAGAACACTCTGAAGTTTGGTGTGTGCGCTAATGTGTTAGGTTTGATCGGTGTGGAACTTGGGAAGCCACCAAAGACCCCATGCTGCCAACTCATTGAGGGTCTGGCTGATCTTGAAGCTGCTGTGTGCCTTTGCACTGCTCTCAAAGCTAATGTGTTGGGCATCAACCTCAATGTTCCCGTCAAGTTGAACTTGCTACTCAACTACTGTGGAAAGAAAATTCCTAAGGATTTCGTCTGCTACTAA 396 0.4798 MASKGALILCLNIILFTVVSSTYVPCNPPPKVPKHPPVPKPPSTKYGSCPENTLKFGVCANVLGLIGVELGKPPKTPCCQLIEGLADLEAAVCLCTALKANVLGINLNVPVKLNLLLNYCGKKIPKDFVCY 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04318 131 CDD HPS_like 47 130 IPR027923 -
Spst3g04318 131 PANTHER - 3 130 - -
Spst3g04318 131 Gene3D - 48 131 IPR036312 -
Spst3g04318 131 SMART aai_6 49 130 IPR016140 -
Spst3g04318 131 Pfam Hydrophobic seed protein 49 130 IPR027923 -
Spst3g04318 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 130 IPR036312 -
Spst3g04318 131 FunFam pEARLI1-like lipid transfer protein 1 47 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04318 Spst-Chr3 94768828 94769223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04318 42 130 Acyl Lipid Metabolism Gene Families AT4G22490 37.079 1.61e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04318 - - gmx:100500229 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04318 3 94768828 94769223 Spst3g04318 3 94768828 94769223 ECH