Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04250 ATGGCTGTGTGTGATGCTAGCCAAAGCCTCCCAAAGTTGCAGATTGAAGCCGTGCTGAGTGTACCACCGTTTAAGGCGACAGAACCACGACGAGTTCGCCAGGTTTTGATGAGTGACACTGACTCAATGGTGAGGTCACAGCCAAAGGCCATTCATGGATGCTACCAAATCGTTCTCTACTATGAGAATTTGAATGAGGAAGAGGGTGATAAGTTTTTGGCTGGTTGGATTGTAGAGTCACTGAGCAGTGCCCTGGTGGAACACCCACTTCTTTCAGGGAGGCTGAGAAGGAAGGACAGTGACGAGCACTGGGGAATGTTAGAGATTGTGTCCAATGATTCTGGCATTCGACTCTACGAGGCACGCTTCCCCATGGTTTTGTCAGAGTTTCTTGCCTTGAGTGTTGAAAAGGAACATCTTGAGGCTGAGCTTGCCTTTTGGAAGGAAATCGATGAGCTCAATCCTCAGTTCTCTCCTCTCTTTTATGTCCAGGCAAGTAGTGCATGCTGTGTTTATTCATTTAGCCACACCTATCAGCTTAAGCTTTTTGAGATGGATAAGGTGACCCAGTTTGAATGTGGAGGATACACAATAGGCATTAGCTGCAGTCTTCTCTTGGCAGATGTTTTGGTGGTAGAGAACTTCCTCAAGACATGGGCTGAAATTCACAATAGTATGTTACACCAAAGAGAAAAGATTAACACACCCATATTTTATCACCCTCTACTCATAAAAAATAACGAGCCCCCCCTTGCTGATACGATCCACCGCACCAAAATTAGAAAAGCACATACTACAGCATTCAAGGTCATTGCCAAAGACTTAAATTTCAACGAGGAATTTTGGAGGGAAGTTGCCATGCTATGCGTTGAGGAAGTAGATCAAAAGCTTCACAAGGGAGTGTGGACAAAATTTAATTTGTTTGTGAAAGAATCCTCTGAGGTCATCAAGGCAGAGGGTCACTCAAAGAATGAATACTGTAAGAAAGTGTTTGACCAAAGCCTAAAGAATCAAATCAGTGGTGCTACTTGGAATGATTTTGGAGAATGCGTAACGTTTCATGAAGGAAACAAGCCTGTCCTTGTTTCTCGTTGGATTGGATCAATTGGTGATGATGGGAACGTTATAGTAGTCCCATGCACAGAGGGAAAGGCCTCTGCTTTGATCACACAAGAAGCACCCCCGCGAAGAAGACAAGTGGTAGCATATGAAGGGGAGAAGAGGGTGAAGGTGGCGGTCATGACATGGCAGGGAGGAGGTGTTGATCCTGTGGCTGTGGGCGTGGGTGCAGGGGAGGGGAGGGTGCTTGGCATGCATGAGCAAGAACATGGGACTGTGGAGATGATTCAGTATAAGCAGTCAGTCTCCACAATTATCCCTTCAGACAATCAATTCACGATGAAAAGGAATCAAGTTCCATCACCAGTTGTGAGTAGTGATCCCCTTTGGAACCTTCCACGGTCAAGGAAAAAATTGATCTGA 1482 0.4555 MAVCDASQSLPKLQIEAVLSVPPFKATEPRRVRQVLMSDTDSMVRSQPKAIHGCYQIVLYYENLNEEEGDKFLAGWIVESLSSALVEHPLLSGRLRRKDSDEHWGMLEIVSNDSGIRLYEARFPMVLSEFLALSVEKEHLEAELAFWKEIDELNPQFSPLFYVQASSACCVYSFSHTYQLKLFEMDKVTQFECGGYTIGISCSLLLADVLVVENFLKTWAEIHNSMLHQREKINTPIFYHPLLIKNNEPPLADTIHRTKIRKAHTTAFKVIAKDLNFNEEFWREVAMLCVEEVDQKLHKGVWTKFNLFVKESSEVIKAEGHSKNEYCKKVFDQSLKNQISGATWNDFGECVTFHEGNKPVLVSRWIGSIGDDGNVIVVPCTEGKASALITQEAPPRRRQVVAYEGEKRVKVAVMTWQGGGVDPVAVGVGAGEGRVLGMHEQEHGTVEMIQYKQSVSTIIPSDNQFTMKRNQVPSPVVSSDPLWNLPRSRKKLI 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04250 493 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 261 - -
Spst3g04250 493 Pfam Transferase family 56 166 - -
Spst3g04250 493 Pfam Transferase family 187 307 - -
Spst3g04250 493 Gene3D - 12 258 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04250 Spst-Chr3 94017591 94021146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04250 81 379 Acyl Lipid Metabolism Gene Families AT3G23840 22.923 3.79e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04250 - - vra:106766294 556.599