Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04229 ATGTCCAACATCCACACTGCAACCAACAGCATGGAAAAGTTGTCAACTTATTTGCATTCCCTATCCCAAACCCCTCACAGGCTCAGAAAAAGAATGCTAGCCACATGGACCCCAGACCAGGAGTTCAACCAAGTCAGGCACAGATCTGGGGCTGACATGAAGAGGAAGCTCAGGTGGTATGATCTGGTTGCTCTTGGTGTTGGAGGAATGCTTGGTGTTGGTGTGTTTGTCACTACTGGCTCTGTTGCCCTTCACCACTCTGGTCCTTCAGTCTTCATTTCCTATATCATAGCAGGAATTTCAGCCCTTCTCTCCTCCTTGTGTTACACTGAATTTGCTGTTCAAGTCCCAGTTGCAGGAGGAGCTTTCAGTTATTTAAGATTAACCTTTGGGGAATTCTTGGGATATTTTGCTGGGGCAAATATACTAATGGAGTATGTGTTCTCAAACGCTGCCGTAGCAAGGAGCTTTACAGAATATTTGAGCATTGCGTTTGGAGAAAATGATCCAAATGTGTGGAGAGTCGAAGTCCATGGCTTGCCGAAGGACTATAACATGTTGGATTTTCCAGCTGTGGCAGTCATTCTTATTCTCACTCTCTTTTTGTGTCATAGTACAAAGGAAAGCTCCATGTTGAACCTCATTATGACAGCCTTCCACGTGATTTTCTTTGGATTCATCATAATCGCTGGTTATTGCAATGGAAGTGCCAAAAACTTGGTTAATCCAAAAGGTCTAGCACCTTTTGGTGTTAGAGGTGTTCTTGATGGAGCAGCAATAGTTTATTTCAGTTATATAGGCTATGACTCCGCTTCAACCATGGCTGAGGAGGTCAAAGACCCTATTAAGAGCCTACCCATTGGAATTGTGGGTTCAGTTCTTATAACCACTTTGCTCTATTGCCTAATGTCTCTGTCTTTGTGCATGATGACTCCTTACAACAAGATATCAGAGAAAGCATCATTTTCAATAGCTTTTCTAAAAGTTGGTTGGAGTTGGGCAAGCAACCTAGTCGGGGCAGGTGCAAGTTTGGGCATAGTGGCTTCTCTCTTGGTTGCCATGTTAGGCCAAGCAAGATACCTTTGTGTTATTGGAAGGGCAAGGTTGGTACCATCTTGGTTAGCCAAAGTACACCCTTCAACAGGCACACCATTGAATGCCACGGTCTTTTTGGGAATTTGCACAGCATCTATTGCACTATTCACAGAGCTTGACATTATAATTGAGTTGATAAGCATTGGCACACTGTTGGTGTTCTACATGGTAGCCAACGCTCTTATATACCGTCGATACGTAATCACTGGCCATGCCCCACCTTCGCACACTCTTTTGTTCCTCTTTCTCCTTTCTCTAAGTGCACTATGCTTCTCCATTGTGTGGAAATTTAAGCAGCAATGGTGGGGTCTAGTACTTTTTGGTGGGTTTATGATCGCCATCACTGCCTTCTATCAACACGTGGTGCCTAATACTACCATTGCCCAACATGCTCAACAACCGCAACATTGGTCCGTGCCATTCATGCCATGGCCACCCTCCATGTCCATCTTTCTTAACGTTTTCCTCATGACCACACTCAAAACCCTTTCTTTCCAACGTTTTGCCATATGGGCATGCCTCATTACCATCTTCTATGTGCTCTATGGCGTCCACAACACTTTTGAGGCAGAGGAGATTGAGATGAGTGGTGTAAGTGTTGTTGGTGATGAAGTGAATTCAAGTGTACACAACTTGCAAACCAAGGTGGAAATTCAAGTGCATTAG 1761 0.4424 MSNIHTATNSMEKLSTYLHSLSQTPHRLRKRMLATWTPDQEFNQVRHRSGADMKRKLRWYDLVALGVGGMLGVGVFVTTGSVALHHSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFLGYFAGANILMEYVFSNAAVARSFTEYLSIAFGENDPNVWRVEVHGLPKDYNMLDFPAVAVILILTLFLCHSTKESSMLNLIMTAFHVIFFGFIIIAGYCNGSAKNLVNPKGLAPFGVRGVLDGAAIVYFSYIGYDSASTMAEEVKDPIKSLPIGIVGSVLITTLLYCLMSLSLCMMTPYNKISEKASFSIAFLKVGWSWASNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTGTPLNATVFLGICTASIALFTELDIIIELISIGTLLVFYMVANALIYRRYVITGHAPPSHTLLFLFLLSLSALCFSIVWKFKQQWWGLVLFGGFMIAITAFYQHVVPNTTIAQHAQQPQHWSVPFMPWPPSMSIFLNVFLMTTLKTLSFQRFAIWACLITIFYVLYGVHNTFEAEEIEMSGVSVVGDEVNSSVHNLQTKVEIQVH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04229 586 Pfam Amino acid permease 58 467 IPR002293 GO:0016020|GO:0022857|GO:0055085
Spst3g04229 586 Gene3D Amino acid/polyamine transporter I 52 491 - -
Spst3g04229 586 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 32 551 - -
Spst3g04229 586 Pfam C-terminus of AA_permease 502 551 IPR029485 -
Spst3g04229 586 PIRSF AA_transporter 491 563 - -
Spst3g04229 586 PIRSF AA_transporter 34 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04229 Spst-Chr3 93702140 93706005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04229 144 556 Organic Solute Cotransporters AT3G10600 51.179 1.42e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04229 - - gmx:100790787 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04229 3 93702140 93706005 Spst3g04229 3 93702140 93706005 PCT