Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04211 ATGGATGGTCTCATCAAGGGCTTGGTAGATGTTGCTCTCGGTGGCGCCGATCACAACGATCGCCAAGAAGAACGCGGTGAACGCTCCTGGGCCGACCTTGTCTCCGGCGATCAGGATCAGGAAGAGCGCTGGGAAGAGGATAGTCACACTTACAGAGCTTCGAACAGACCTCATCAGGAACAGTACCATCTTCAGCATGAGGAGTACCAATCTCAAAATTTTAACACTTCCCACAAGGTGGATGAAGATCAAGATGGATGGCAGACTGTTGTCAAACCCTCTAGGCGGACACACAAGGTTCCCAAGGAAAATTGGCACAGCTATAAGCGACCTTCTAATGAGCAAGAATACTCAGACGAGACTGAAGTTGGGGCTGATTTGGAGCCCTCAGAAGATGAACTTGCTGATCTCGCCAGAGCTTGTGACAAACTCTGGGATCTTGATTTAAATCGGCTGATACCTGGCAAAGACTATGAAATTGACTGTGGTGAAGGGAAAAAGCCTTCCCAAAATGAAGATATGGCAGAGGGGAACTTGTTTACATGGGTTAGTCATGATGTATTCAGAAAGCCTACATTTGCTCGTTTTCTCTCACTTTTAGATAATTACAATCCACATCAAGGATGTAAGGAAGTAGTCACATCTGAAGAGAGAGAAGAGCAAGCTTCTTTCATAGAAGAAATCAGTAGAACAGCACCAATTAAATATCTTCACAAGTATCTTGCATCCAAGGGAATTGTATCAGAGAGTTACCAAGATTTCAAAAGAAGGATGACAAGTCTGTGGTTTGACCTTTATGGCCGTGGTGGCACTTCTGGTTCTTCTTCTGCTTTTGAACATGTTTTTGTTGGAGAAATCAAACAATGTGGCGAAGTTTCTGGCTTTCATAACTGGCTCCAGTTTTACCTTGAAGAAGAAAAGGGGAAAGTTGATTATCAGGGCTATATTTTTCCCCGTCGACGGGGACAAATTCCTGACTCTGAAACCCAGCTTCTGACTATTCAGTTTGAATGGAATGGTGTTCTGAAATCTTTATCAAGCACTTTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTATGTTGGTGGGGAGGATAACCACATTCAACTCGGTCCATATGCAGTTAATATTAAGTGTTATCGTTTTGGCGATAAGATTGGATCTGTTTTCCCCATTGCAGATTCTTGA 1206 0.4353 MDGLIKGLVDVALGGADHNDRQEERGERSWADLVSGDQDQEERWEEDSHTYRASNRPHQEQYHLQHEEYQSQNFNTSHKVDEDQDGWQTVVKPSRRTHKVPKENWHSYKRPSNEQEYSDETEVGADLEPSEDELADLARACDKLWDLDLNRLIPGKDYEIDCGEGKKPSQNEDMAEGNLFTWVSHDVFRKPTFARFLSLLDNYNPHQGCKEVVTSEEREEQASFIEEISRTAPIKYLHKYLASKGIVSESYQDFKRRMTSLWFDLYGRGGTSGSSSAFEHVFVGEIKQCGEVSGFHNWLQFYLEEEKGKVDYQGYIFPRRRGQIPDSETQLLTIQFEWNGVLKSLSSTLVGVSPEFEIALYTLCFYVGGEDNHIQLGPYAVNIKCYRFGDKIGSVFPIADS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04211 401 MobiDBLite consensus disorder prediction 16 65 - -
Spst3g04211 401 SUPERFAMILY EndoU-like 135 399 IPR037227 -
Spst3g04211 401 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 133 401 IPR018998 GO:0004521
Spst3g04211 401 Pfam Endoribonuclease XendoU 137 397 IPR018998 GO:0004521
Spst3g04211 401 MobiDBLite consensus disorder prediction 13 124 - -
Spst3g04211 401 CDD XendoU 133 397 IPR018998 GO:0004521
Spst3g04211 401 MobiDBLite consensus disorder prediction 96 117 - -
Spst3g04211 401 PANTHER PLACENTAL PROTEIN 11-RELATED 65 400 IPR039787 GO:0004521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04211 K14648 - gmx:100813919 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04211 3 93584779 93588296 Spst3g04211 3 93584779 93588296 ECH