Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04202 ATGAAATTCGCTTCATACCTAGTGATTTTCTTTCTCTTTCTCTTCCAAAGCTCGAACGGTTCCAATCTTATCTCTCAATCCTGCAAGGAGGCCTCGAAGAATGACCCAAATTTGAGGTATGATTTCTGTGTTGCATCCCTTGAAGATGAGTCCAAGTTGCAACCACCACCCTCCAACCTCGAAGGTCTCGTGGGCATGTCAATTCAACTAACCAAGTCCAACGGAACCAACATGGTTTCCATCATTTCGAAGCTCATGAAGGACAAAACTTTTGATCAATACGCAAAGGTTTGCTTACGAGATTGCTTTGATCTTTACTCGGATTCCCTTTCGGATTTAGATGATGCTGTGGTTGCCTTCAAGTCCAAGGATTTGGACACGGCTGCTATAAACTTGAGTGCTTCCTTGGATAACTCTGTTACCTGTGAAGATCAATTCAAGGACAAGAAAGGTGAAGCGTCTCCTTTAACAAAGGAAAACCGCGTCTTCTTCCAACTCAACGTAATATCTCTGGCCTTCATCCAAATGTTTCATCAACATTATTGA 546 0.4249 MKFASYLVIFFLFLFQSSNGSNLISQSCKEASKNDPNLRYDFCVASLEDESKLQPPPSNLEGLVGMSIQLTKSNGTNMVSIISKLMKDKTFDQYAKVCLRDCFDLYSDSLSDLDDAVVAFKSKDLDTAAINLSASLDNSVTCEDQFKDKKGEASPLTKENRVFFQLNVISLAFIQMFHQHY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04202 181 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 178 - -
Spst3g04202 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 177 IPR035513 -
Spst3g04202 181 Pfam Plant invertase/pectin methylesterase inhibitor 22 172 IPR006501 GO:0004857
Spst3g04202 181 CDD PMEI-Pla_a_1_like 28 176 IPR034088 -
Spst3g04202 181 NCBIfam pectinesterase inhibitor domain 1 177 IPR006501 GO:0004857
Spst3g04202 181 SMART PMEI_2 19 173 IPR006501 GO:0004857
Spst3g04202 181 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Spst3g04202 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 21 178 IPR035513 -
Spst3g04202 181 FunFam Putative invertase inhibitor 19 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04202 Spst-Chr3 93445287 93445832 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04202 - - gmx:100817110 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04202 3 93445287 93445832 Spst3g04202 3 93445287 93445832 ECH