Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04192 ATGGCAGAGTTTCCAGGATATTTTCGTTACTGCTTGAACACAGGAAAACTTGTTCTTCTAGCAATTTTGGTCTCTGGAGGAATTGTCTTGCAGATTTTGGCATGTGCCTTGTATAAAAATTGGTGGCCAATGCTAACTGTGATAACATATGTCCTTCTACCAATGCCTTTGCTCTTCTTTGTGGGATCCGACCATTCTTCTTTATTTTCTGAATCAGATAACAGCTGGGTGAATGCAACCAAGTTCTTAACCGGGGCATCAGCTGTTGGAAGCATTGCCATTCCAGCCATATTAAAGCATTCTGGTGTTATCAGTTGGGGAGCTTTTGCAATGGAACTCTCTTCATTCTTTGTGTTTGTATCTGCCATAATGTGTTACTTAAGGATGAATGATGAAGATGATTATAGTTATCTTTAA 417 0.3933 MAEFPGYFRYCLNTGKLVLLAILVSGGIVLQILACALYKNWWPMLTVITYVLLPMPLLFFVGSDHSSLFSESDNSWVNATKFLTGASAVGSIAIPAILKHSGVISWGAFAMELSSFFVFVSAIMCYLRMNDEDDYSYL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04192 138 PANTHER LEPTIN RECEPTOR-RELATED 15 136 IPR007262 -
Spst3g04192 138 Pfam Vacuolar protein sorting 55 17 133 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04192 Spst-Chr3 93347096 93347923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04192 1 138 EF-hand Containing Proteins AT1G32410 69.286 1.10e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04192 - - gmx:100775400 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04192 3 93347096 93347923 Spst3g04192 3 93347096 93347923 PCT