Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04050 ATGAAGAACACAAACACCAACACGAAATTCATCCTTCTCCACCCTTACATACAAAAACAAGGAAGCTCCAATCGCTTATGGCTCCTAGCCTTCGTATCAATCCTCACTCTCGCTTTCCTCGTCACCCTCATTTACTCCAGAGAATCCACCTTCATCACCACCGCGACATCTTCTGTGATTGCTTCTTCCAATGCCCCGGTTTCTGGTCTCGGAAGTGCTCCTTTGCCAGCCACAGTGATCAACACTCTCCTCCACTACGCCTCAAAATCAAACGACACCAACCAGATGCCACATTCAGATCTCAAACCCATCTCTGACGTGCTCCGAAAGTGCCCATCCCCATGCAACTTCCTCATCTTCGGTCTCACAGCCGAAACCCTTCTCTGGAAAGCCCTCAACCACAATGGCAGAACCGTGTTCATCGACGAAAACCGCTACTACGCTGCATATTACGAAGAACTGCACCCAGAAATCGACGCCTACGACGTGCAATACACCACCAAAAGAAGCGAGATGAAGGAGCTCATAGCCTCTGCTAAAGAACGGGTAGCCAACGAGTGCAAGCCAGTTCAGAATCTTCTGTTTTCAGACTGCAAACTGGGACTCAACGACCTTCCCAACCACGTGTACGAGGTTGACTGGGATGTCATATTGGTGGACGGACCACGTGGCGACTGGCCCGATGCTCCCGGTAGAATGTCGGCTATCTTCACCGCAGGGGTTCTGGCGAGGAGCAAAAAGGGTGGGAACCCTAAGACTCATGTGTTTGTGCATGACTTCTCTGGGGAAGTGGAAAAGGTTTGCGGGAGTGAGTTTCTGTGCAGTGAGAATTTGTTGGAGGCAAGTGGGAACTTGGGGCATTATGTTGTGGAAAGGATGGATGAGAGTAGTGTTCAGTATTGTAAGAGTCACTCTTCTTCTGGATCAGGGAATGCTTCATCGACATAA 948 0.4989 MKNTNTNTKFILLHPYIQKQGSSNRLWLLAFVSILTLAFLVTLIYSRESTFITTATSSVIASSNAPVSGLGSAPLPATVINTLLHYASKSNDTNQMPHSDLKPISDVLRKCPSPCNFLIFGLTAETLLWKALNHNGRTVFIDENRYYAAYYEELHPEIDAYDVQYTTKRSEMKELIASAKERVANECKPVQNLLFSDCKLGLNDLPNHVYEVDWDVILVDGPRGDWPDAPGRMSAIFTAGVLARSKKGGNPKTHVFVHDFSGEVEKVCGSEFLCSENLLEASGNLGHYVVERMDESSVQYCKSHSSSGSGNASST 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04050 315 PANTHER OS11G0490100 PROTEIN 12 302 IPR006514 GO:0045492
Spst3g04050 315 NCBIfam TIGR01627 domain 75 301 IPR006514 GO:0045492
Spst3g04050 315 Pfam Polysaccharide biosynthesis 101 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04050 Spst-Chr3 91448055 91449002 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04050 - - gmx:100790865 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04050 3 91448055 91449002 Spst3g04050 3 91448055 91449002 ECH
Spst3g04050 3 91448055 91449002 Spst3g04050 3 91448055 91449002 PCT