Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03945 ATGGGTAGAATATTACAACAGTATGTGGCTATGAAAAGGGATACTGATACTGTAGTTGCTGGTTTAATCGAGTCCGATATAAATGAGCTCAAGCATGCGGCCACGAAGCTCCTCCACGATGCAACCGTGTTAGGAGGCAAAGGCTTTGGCATTTCTTTCTTTAAGTGGCTCTCTTCATTTGCTGCCATTTATTTACTGATACTGGATAGCACAAACTGGAGGACGAATATGCTGACATCGTTATTAGTACCTTACATATTCTTCAGTTTTCCCGACTCGATGTTCCACTTTTTAAGAGGAGAAGTTGGAAAATGGATTGCATTCGTGACAGTGGTGCTGAGGCTCTTCTTCCCAAGGCATTTTCCCGATTGGCTGGAAATACCTGGCTCAATGATTCTTATTTTGATAGTGGCCCCCGACATGTTTTCTGAAAAATTTAGGAATAACTGGATCGGATTAGCAATTGATCTTTTCATTGGTTGTTACCTTCTACAAGAACATATCAGGGCTTCTGGTGGATTCAGAAATTCTTTCACACAGAGACATGGCATATCAAATACCCTTGGCATCCTCCTCCTCATAGTCTATCCTATTTGCGCATTCATTATTCATTAA 615 0.4114 MGRILQQYVAMKRDTDTVVAGLIESDINELKHAATKLLHDATVLGGKGFGISFFKWLSSFAAIYLLILDSTNWRTNMLTSLLVPYIFFSFPDSMFHFLRGEVGKWIAFVTVVLRLFFPRHFPDWLEIPGSMILILIVAPDMFSEKFRNNWIGLAIDLFIGCYLLQEHIRASGGFRNSFTQRHGISNTLGILLLIVYPICAFIIH 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03945 204 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 7 202 IPR008892 GO:0016020
Spst3g03945 204 Pfam Cold acclimation protein WCOR413 15 193 IPR008892 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03945 Spst-Chr3 89817972 89818845 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03945 - - gmx:100817084 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03945 3 89817972 89818845 Spst3g03945 3 89817972 89818845 ECH