Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03942 ATGTTACGGGCATGTTTGGGGTTGAATTACCATGGTAGAATGGAGGAGCTGCCAGGGGCGTTTGGAAGCAGCGCCAGTTTGGCTCTCCGATTGGGTCAAACCGTGTTCTCCACCGCTTCTCTTCTGTTCATGTGTTTGGATGTTGATTTCTACGGTTACACGGCTTTCTGCTATTTGGTGACAGTCATGGGTTTGGTAATTCCCTGGAGCATCACACTGTTGGTGGTGGATGCATACTCTGTGTTTATAAAATGTTTACCTCTCCAACGAAGACTAGTAATGATAGTCTTTTTGGGGGACATGATTTTGTCATATCTGTCATTAGCTGCAGCATGTTCAACAGCCAGTGTCACAGATCTCCTGCTCGATGCCGATCGATCGTATTGCCCAGCAAAGTTATGTGGTAGATATCAACTATCTGCTGCTATGGCCTTCTTGTCTTGGTTTCTTTCATCAGCATCGTGTCTCTTTAACTTCTGGCTTTTCCCTTCTTTACATTCTAACTGTCCTATTGGATCAAATGGGCACCATGCCCTATATCTTGGAGATTTTGGAGCAGAGGCGATGGAGTGA 573 0.4555 MLRACLGLNYHGRMEELPGAFGSSASLALRLGQTVFSTASLLFMCLDVDFYGYTAFCYLVTVMGLVIPWSITLLVVDAYSVFIKCLPLQRRLVMIVFLGDMILSYLSLAAACSTASVTDLLLDADRSYCPAKLCGRYQLSAAMAFLSWFLSSASCLFNFWLFPSLHSNCPIGSNGHHALYLGDFGAEAME 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03942 190 PANTHER CASP-LIKE PROTEIN 5B3 14 164 IPR045009 -
Spst3g03942 190 Pfam Casparian strip membrane protein domain 22 150 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03942 Spst-Chr3 89786610 89788785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03942 - - gmx:100791729 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03942 3 89786610 89788785 Spst3g03942 3 89786610 89788785 ECH