Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03941 ATGGGAAATTGCGTTTTCAGCTCCTACGAAACCACGCAGGAGGCCACGGCCAAGGTCGTCGTTCACGACGGCAGGATGGAAGAATTCTCATACCCAGTCAAGGTCTCTTATCTCTTGCAACTCTACCCCGCCTGTTTCATATGCGACTCCGACGAGATCACCTTCGACGATGTCGTAACGCCGGTTCACCACGACCACGAGTTGAAGCCCGGCCAGCTCTATTTCGCGCTCCCGCTTAACCACCTCAAGCGTCACCTCCTGCCTCACGAGATGGCCGCTCTAGCCGTCACCGCCACCTCGGCGCTCGCCAGGCGCCGCGGCCACAAATGTGGCTCTCGTCGGCAACAGATTTTGATTTTCCCTGGCGAGGGGAATGCCAAGCCTCGCCGGAGAGTGGCGCCGGACGGTGGTGGTGTGAGGGGTACGGTTGATAGCCGTGGTGTCGCGAGGAAACAAATGAATGGACATGGCGGTGTCAAGGGGAGGGGGAAGTTCACGGCGACCTTGAGTTCCATACCGGAGCAGGGGTAG 531 0.5932 MGNCVFSSYETTQEATAKVVVHDGRMEEFSYPVKVSYLLQLYPACFICDSDEITFDDVVTPVHHDHELKPGQLYFALPLNHLKRHLLPHEMAALAVTATSALARRRGHKCGSRRQQILIFPGEGNAKPRRRVAPDGGGVRGTVDSRGVARKQMNGHGGVKGRGKFTATLSSIPEQG 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03941 176 MobiDBLite consensus disorder prediction 125 176 - -
Spst3g03941 176 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 133 - -
Spst3g03941 176 Pfam PADRE domain 1 174 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03941 Spst-Chr3 89768613 89769143 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03941 - - pvu:PHAVU_003G250000g 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03941 3 89768613 89769143 Spst3g03941 3 89768613 89769143 ECH
Spst3g03941 3 89768613 89769143 Spst3g03941 3 89768613 89769143 PCT