Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03938 ATGTCCTTTATAACTTCCTTTTACTGGGAGATTTTGTTAACTTTTGGTAAACGTTTTGACATTTCACACCGGTCTACTACTCCAAAAGGCCACCCTTTACATAAAGGCTATGAGCATAGCACAAAACGCTTAGCACCTCACCAGGGGTTGTCAAAAGTGAAGGCTCACCGGATGCTGACGCTCTGCTGCTTTGTTTTCCCACTTTCTTTTGTTTTGGTGGTGTTGTATATTTGGTTCACTGGAAATGACTTTGGTTTTGTATGGCTTTTAGGCATGGGCTTTCCTGATAAGAAAACAATGGAGGATTGTAATGCAGATCTTAAGACCTCAGATCGAACAAAGCTGGGTACAGGGTACCTCACGGAATGCGGTAAACCCAGGAAAAAACAAACCCCTACAAATGATGTTCAACTTACACTGAAGCAAGAGATTTTACAATTAGAGAAAAGACTACAAGATCAATTTGAGGTCAGATGCACGTTAGAAAAGGCACTTGGATACAGACCTACATCTCTTGTTACATCAAATGATATGATACTGCCCAAGCCAACGTCCAAATTAATTAAAGAGATTGCGGTGTTAGAGTTAGAAGTTGTGTATTTGGAACAATATCTTCTCTCCTTGTATCGTAAAGCATTTGATGAACAACTACCCTCTGTAGCTCCATTCACGAAGGAGGAAAAAGTAAACTCTCCAACAACACCTAGAGCAAGATTTGTTGAGGTATCTAAGCCTGAGCTCTCAACCACAAGAGGAAGCTCTGCAATACAATCAATTGATCATGAGCTAGATACTACGCAAAAGGAATATACTGTACATGAACCTGAGAATTTAGGGAAAGAATACGATGTACATCAACCGGTAGTAAAGTACTTAGACTCAGGTGTATGTCGTTGTCACTCCTCATTATCCCAGTGTACAGCATTTACAGCAAGAGTATCTCCTCCTGCAGCAGAAGAATTAACTGAATCTCTGCGTGCTTGTCATTCCCAACCGCTGTCCATGATGGAGTATGCCCAAAATGTTGATGCTTCATCAAGAATAATCAGTCTAGCAGAACATCTTGGCACTCGAATATCTGATCATATTCCAAATACACCTAATAGGCTTTCTGAGGATATGGTCAAATGCATATCAGCTATATATTGTAAACTCGCAGATCCATCTAAGACAAATCTTGGTCTTTCATCTCCCAGTTCATCCTTGTCTTCAACTAGTGCCTTTTCTATTGGAGATCAAGGAGACATGTGGAGTCCAGGATTCAGGAATAATTCCTCCTTTGATGTGCGGTTAGACAATCCTTTCCATGTGGAAGGACTCAAGGAGTTTAGTGGGCCATACAGCACCATGGTTGAGGTATCATGGATTTACCGAGAGAATCAGAAATTGGGCGATACTGAGCAGTTGCTCAAGAATTTCAGATCACTTATTTGTCAATTAGAAGATGTAGATCCTGGGAAGTTAAAACATGAGGAGAAATTAGCTTTCTGGATCAACATACACAATGCTTTGGTGATGCATGCATTTTTGGCTTATGGAATTCCACAAAACAATGTGAAAAGAGTCCTCCTTCTGTTGAAGGCTGCATATAATGTTGGTGGTCATACAGTCAGTGCAGACACAATACAGAACACTATACTCGGTTGCCAGATGCCTCGCCCTGGACAGTGGTTCCGCTTGTTCTTTACTCCAAGGACAAAATTCAAATCTGGAGATGGACGACAAGCATTTAGAATTGAGCATCCTGAGCCTCTTCTACACTTTGCACTCTGTTCAGGAAACCATTCTGACCCAGCGGTACGTGTATATACACCCAAGAGAGTGCTTCAAGAACTAGAAGCTGCAAAGGAAGAATACATTCGAGCCACCTTTGGCGTACGGAAGGACCAGAAAATACTATTACCTAAGCTTGTGGAGTCATTTTCCAAAGGCTCGGGTTTAAGCCCTGCTGATAGCTTGGAGATGATTCAACATTCTCTACCTGAATCTCTAAGAAAGAGTGTTAAGAAATGTGACCTTGCAAAATCTAAGAAGTGCATAGAATGGATCCCACACAATTTCACTTTTCGATATCTCATACCCAAGGAGCAGGTAAAGTAA 2100 0.4124 MSFITSFYWEILLTFGKRFDISHRSTTPKGHPLHKGYEHSTKRLAPHQGLSKVKAHRMLTLCCFVFPLSFVLVVLYIWFTGNDFGFVWLLGMGFPDKKTMEDCNADLKTSDRTKLGTGYLTECGKPRKKQTPTNDVQLTLKQEILQLEKRLQDQFEVRCTLEKALGYRPTSLVTSNDMILPKPTSKLIKEIAVLELEVVYLEQYLLSLYRKAFDEQLPSVAPFTKEEKVNSPTTPRARFVEVSKPELSTTRGSSAIQSIDHELDTTQKEYTVHEPENLGKEYDVHQPVVKYLDSGVCRCHSSLSQCTAFTARVSPPAAEELTESLRACHSQPLSMMEYAQNVDASSRIISLAEHLGTRISDHIPNTPNRLSEDMVKCISAIYCKLADPSKTNLGLSSPSSSLSSTSAFSIGDQGDMWSPGFRNNSSFDVRLDNPFHVEGLKEFSGPYSTMVEVSWIYRENQKLGDTEQLLKNFRSLICQLEDVDPGKLKHEEKLAFWINIHNALVMHAFLAYGIPQNNVKRVLLLLKAAYNVGGHTVSADTIQNTILGCQMPRPGQWFRLFFTPRTKFKSGDGRQAFRIEHPEPLLHFALCSGNHSDPAVRVYTPKRVLQELEAAKEEYIRATFGVRKDQKILLPKLVESFSKGSGLSPADSLEMIQHSLPESLRKSVKKCDLAKSKKCIEWIPHNFTFRYLIPKEQVK 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03938 699 Pfam Leucine-zipper of ternary complex factor MIP1 134 215 IPR025757 -
Spst3g03938 699 Pfam Protein of unknown function, DUF547 487 620 IPR006869 -
Spst3g03938 699 PANTHER UNCHARACTERIZED 117 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03938 Spst-Chr3 89726488 89731514 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03938 - - gmx:100816025 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03938 3 89726488 89731514 Spst3g03938 3 89726488 89731514 ECH
Spst3g03938 3 89726488 89731514 Spst3g03938 3 89726488 89731514 PCT