Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03933 ATGGCAGAAATTAGGCTAACCAGGATGGAGTCCGGCCAAACCAAGATTAAAAATGTTCCAATAGCTGTGACCCCAGAAGGGTTTTGGTGCTGCCCTTCTCCTGTGGTGTTTCAGAAAAGCCTAAAGGCTCAGAATCCTCTCCATAAGCCCAAAGCCTCTTCACCCCCATCAAAATCCAGTGTTAAAAAAAAGCCAGTGTCTGTTCCAGTGTATGAGAGAAGAACTGCTGCAGTCTCAGCTGCCCCTTCTAGATTGGTGCTTTCTGATGATCAGCAATGTGCAACTGCTCCAGAAAGACCTGCTCCTGCAACCTCATCTGTGGCTGCTGCAGAGAGGGGACCCAGGCCAAAGATTGAATCTTTGCCAAAGAAGGTTGCTATTGAGTTTGGTGAACCTGGAAGTTGTGATATGAAAGTGATTTTGTTAGGGAAGCAGGGATTTTGTGTGAAGTTAAGTGTGCACAGGAATGTTCTGATTGAGAAGAGTAGCTTCTTCTCTGAGAAACTATCTGAACAATCGGGTTTGTCATGTCTCCAAATCGGTGACTGTGAGGATGTTGAGATATATGTTGAAACTGTTGGTCTTATGTACTGTAAGGAGATGAAGCAGCGGCTTATGAAGCAAAGTGTTTCTCGCATTCTTCGAATACTTAAGGTAGCAGAATTCCTTGGGTTCAGCTCTTGCATCCAATCATGTTTGGAGTTCTTGGAAGCAGTCCCTTGGGTTGGAGATGAAGAGGAGGAAAAGGTGGTCTCAACTGTGCTACAACTCCAAGCAGAAGGAATTGGAGTCAACCCTGTGCTGAAACGAATTTCATCTGACATTTCTAATGTCCCTAAGGACACTATTTCCCACATCATCGACCTTGTTCTGAAAAGCAACGAGGAAAGAGGCCGCCGAGAGATGAAATCCATTGTTCTAAAGCTCCTGAGGGAGAACAACAGTCTTCCTAGCTATGCGCGCACAACCGATATTTGTAATGACACAATTTACGGATCATGCAGAACCTGCTTAGACTCATTACTGACACTGTTTAAGCAGGCTGCAGAACCGGATGAGGACCGAGATCGTCTAGCAAAGTGCATAGCTCTTGAAGCTGATAACTTAACATGGTTGCTTGAGATTTTAGTTGACAAACAAGCTGGTGATGAGTTTGCACTTATGTGGGCAAACCAACAGGAACTGGCCGTGTTACATGCAAAGCTGCCAACAGTGTTGCGCTACCATGTTAGTTGCCTTTCTGGTAGACTGTATGTTGGCATTGGGAGAGGGGAGTTGCTGCCTTCAAAGGACACACGCCGGTTGTTATTACAGACATGGCTGCAGCCTCTGATGAATGACTACAACTGGCTGCAGCATGGATGCAGGTCATTTGATAGGAAACTTGTGGAAGAAGGAATCGGGAGGACTATTCTCACCTTGCCTCTGGAGGATCAACAGAGCATTTTGCTTTCATGGTTGGGGAGTTTCTTGAAAACTGGTGATAGCTGTCCAAATCTTCAGAGGGCCTTTGAGGTGTGGTGGAGGAGAACTTTCATTAGGCCTTATGTGGAGAACCAAGGTAACGTTGCTGTGTCAGATAGTTCAATGTTGCCACAGCGACATGAATGA 1611 0.4575 MAEIRLTRMESGQTKIKNVPIAVTPEGFWCCPSPVVFQKSLKAQNPLHKPKASSPPSKSSVKKKPVSVPVYERRTAAVSAAPSRLVLSDDQQCATAPERPAPATSSVAAAERGPRPKIESLPKKVAIEFGEPGSCDMKVILLGKQGFCVKLSVHRNVLIEKSSFFSEKLSEQSGLSCLQIGDCEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILKVAEFLGFSSCIQSCLEFLEAVPWVGDEEEEKVVSTVLQLQAEGIGVNPVLKRISSDISNVPKDTISHIIDLVLKSNEERGRREMKSIVLKLLRENNSLPSYARTTDICNDTIYGSCRTCLDSLLTLFKQAAEPDEDRDRLAKCIALEADNLTWLLEILVDKQAGDEFALMWANQQELAVLHAKLPTVLRYHVSCLSGRLYVGIGRGELLPSKDTRRLLLQTWLQPLMNDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWLGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENQGNVAVSDSSMLPQRHE 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03933 536 Gene3D Potassium Channel Kv1.1; Chain A 129 259 IPR011333 -
Spst3g03933 536 SUPERFAMILY POZ domain 135 236 IPR011333 -
Spst3g03933 536 MobiDBLite consensus disorder prediction 89 114 - -
Spst3g03933 536 MobiDBLite consensus disorder prediction 46 68 - -
Spst3g03933 536 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 125 521 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03933 Spst-Chr3 89661010 89664717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03933 - - gmx:100789609 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03933 3 89661010 89664717 Spst3g03933 3 89661010 89664717 ECH
Spst3g03933 3 89661010 89664717 Spst3g03933 3 89661010 89664717 PCT