Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03923 ATGACCTTGGACGTGGCGTACCTGCGAGGCTCCATGGCGGCAATCTTCTCCGTGCTCCAACACTCCTCATGCCCGGAGAACGTAATCTTCCACTTCGTCTCCGCAGCTTCTAAACCTTCCACCTTCGCAACTCTAAACCAAACACTAACCATTTCCTTCCCTTACTTGAATTTCCAAATGTACCCCTTCGACGACGACGCCGTTTCGCGCCTCATCTCCACCTCCATTCGCTCCGCCCTGGACACGCCTCTCAACTACGCGCGAAGCTACCTTTCAAACCTCCTCCCTCGCTGCGTCACCAGAGTCGTCTATATCGACTCCGACCTAATCCTCGTCGACGACATCGCAAAACTCGCTGCCACGCCGCTCGGGGAGGACGCGGTCCTCGCCGCACCGGAGTACTGTTCCGCCGACTTCTCCGCCTACTTCACGCCCTCGTTCTGGTCCAATCCCTCGCTCTCGCTATCGTTCGCGAACCGGAAGCGACCGTGCTACTTCAACACCGGCGTGATGGTGATCGACCTCCAGCGGTGGCGAGCAGGGGACTACACGACGGCGATCGAGGAGTGGATGGAGCTGCAGAAGAGGATGCGGATCTACGAGCTCGGGTCGCTTCCGCCTTTCCTGCTGGTGTTCGCTGGGAGGATTGCGGCAGTGGATCAGCGGTGGAACCAGCACGGGCTCGGCGGGGATAATTTTCATGGGCTTTGCCGGGAACTGCATCCTGGACCCGTGAGCCTGCTGCATTGGAGTGGGAAGGGGAAGCCTTGGGCCAGGCTCGACGCCAATAGGCCTTGTCCTTTGGACGAGTTGTGGGCTCCCTACGATTTGCTCCAAACTCCTTTTGCTATTCAGGCGTAG 861 0.5889 MTLDVAYLRGSMAAIFSVLQHSSCPENVIFHFVSAASKPSTFATLNQTLTISFPYLNFQMYPFDDDAVSRLISTSIRSALDTPLNYARSYLSNLLPRCVTRVVYIDSDLILVDDIAKLAATPLGEDAVLAAPEYCSADFSAYFTPSFWSNPSLSLSFANRKRPCYFNTGVMVIDLQRWRAGDYTTAIEEWMELQKRMRIYELGSLPPFLLVFAGRIAAVDQRWNQHGLGGDNFHGLCRELHPGPVSLLHWSGKGKPWARLDANRPCPLDELWAPYDLLQTPFAIQA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03923 286 Pfam Glycosyl transferase family 8 1 259 IPR002495 GO:0016757
Spst3g03923 286 FunFam Hexosyltransferase 1 266 - -
Spst3g03923 286 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 277 IPR029044 -
Spst3g03923 286 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 274 IPR029044 -
Spst3g03923 286 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03923 Spst-Chr3 89401759 89402619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03923 1 282 Glycosyltransferase AT3G50760 71.479 4.50e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03923 K20893 - gmx:100805007 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03923 3 89401759 89402619 Spst3g03923 3 89401759 89402619 ECH
Spst3g03923 3 89401759 89402619 Spst3g03923 3 89401759 89402619 PCT