Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03920 ATGACGTCTAAGAAAAACCTAGCCCAGCGCCTCCTCAACATCACCAAAATCGCCAACTATCGCATTTCCCCCTCCTTTCAGTCTCCCAATCCGGCAAAACCCAGCATTGCTCCGGATCCTGGAAACAGAAGAATCTTCCCCCGCTTCTTACACAGGAATTCCGGCCTCTCACTGGAGCTTCGGCCGCCGGCTGCCATCAGCATCCTCCAGCGGTTCCAGGAGATGGGCATTGCGTGGAACCGGATCCGGTTGGACGGTCTCAGTCCACCGGAGAAACAAGAAGCGGTAGCGGGAGACGTGAGGAAGGTGCTGAGAGCTGTGCAAATCGAAACGGTGAAATCAAAGCTACGGAAAATCCCGGAGAGTTGCATATCATATTCGGAGTTCATTCAAATGTGCGGCGACGACAATTGTTCCGACCAGGAGCAAGCGAAGAGCGTGGCGCAGATGCTGGACGATTCAGCGTCAGTTATTGTCTTAGGAGATGTCGTCTTCCTCAGACCTGAGCAGATAGCACAAATCATTCAGTCTATGCTCCCTCAACCAGGAGTGAAAGCGTCGGAGTCAGCAAGAAAAGAACTGGAAGAAATGGAAAAAGTGAAAGCAGGAATTGACCAGAGAGCGAGGACCTTGGTTCGACGTGAACTCTGGGCTGGGTTGGGTTTTCTAGTGGCGCAAACAGCTGGGTTCATGAGACTGACATTTTGGGAACTATCCTGGGATGTGATGGAACCAATATGTTTCTATGTTACTTCCATGTACTTCATGGCTGGCTACACCTTCTTCATCAGAACCTCCAAGGAGCCTTGCTTTGAAGGCTTCTATCAAAGCCGTTTCAGCAGCCAACAGAAGCGTCTGATGAAACGTCACAATTTTGACATTGCCAGGTATAATGAGCTCAAGGCTGCTGCCCCACCTGCACCCTCTTCAGAGATTCACACATCCTTTGTTCACCCCCCTGTTGAGCAATTTCACAAAAGTTTGTAG 987 0.5046 MTSKKNLAQRLLNITKIANYRISPSFQSPNPAKPSIAPDPGNRRIFPRFLHRNSGLSLELRPPAAISILQRFQEMGIAWNRIRLDGLSPPEKQEAVAGDVRKVLRAVQIETVKSKLRKIPESCISYSEFIQMCGDDNCSDQEQAKSVAQMLDDSASVIVLGDVVFLRPEQIAQIIQSMLPQPGVKASESARKELEEMEKVKAGIDQRARTLVRRELWAGLGFLVAQTAGFMRLTFWELSWDVMEPICFYVTSMYFMAGYTFFIRTSKEPCFEGFYQSRFSSQQKRLMKRHNFDIARYNELKAAAPPAPSSEIHTSFVHPPVEQFHKSL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03920 328 Pfam Mitochondrial calcium uniporter 142 300 IPR006769 -
Spst3g03920 328 Coils Coil 187 207 - -
Spst3g03920 328 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 34 308 IPR039055 GO:0051560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03920 Spst-Chr3 89340684 89344205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03920 K20858 - gmx:100785566 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03920 3 89340684 89344205 Spst3g03920 3 89340684 89344205 ECH