Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03909 ATGGCAACTTCCGCTTCCAATGCCGTTCTCCTTGGAGACGTCTACTTCGACGACGTCGCCGCCAAGCCCTCCGGCGTTCGCTTCCGGGACAGAACTCGCCGCGCCGCTTTGCGAGCCACCGTCAATCTCACAAGATTGCAACCCTTGAACGGTCTCTTGAACTTCGGCTGCTCCACTTCCGATGCAACTTGGAGGAGTTGGAATCCGAGCTCGCTCCTTGTTGGGACCAAGCACTCCTCCTTTCCTTGCTGCTCCGCCGAGACAACGCCTCATGTTCAACCCCTTGCCTCCTCCACCTTTTCAGTCGACCAAACCAATTTTGGTGCGGAGAGGTTGAAGTTGTTTTCGGGGTCTTGTTACCTACCACATCCGGATAAGGAGGACTATGGTGGAGAGGATGCACATTTCATTTGCGTTGATGAACAAACAGTTGGTGTGGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCTGGACTGTTTGCTCGAGAACTCATGTCCCATTCCGTTAGAGCAATTGAAGAGGAACCCAAAGGTTCTGTTGATCCTGCAAGGGTTTTAGAGAAGGCTCACTCGTTTACAAAGGCCAAGGGTTCATCGACAGCATGTATCATCACACTTACTGATATGGGACTGCATGCCATTAATTTGGGTGATAGTGGGTTCATTGTGATTAGAGATGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATGACTTCAATTTTACATATCAACTGGAGAGTGGAAATGGATGTGATCTACCCAGCTCTGGTGAGGTCTTTATGATACCTGTTGCCCCAGGAGATGTTGTCGTTGCTGGAACAGATGGATTGTTTGACAATCTGTACAATGATGAGGTTGCTGAAGTTGTTCTACATGCAGTTGGAGCTGGATTAGAACCCCAAGTAACTGCTCAGAGGATAGCAGCACTGGCTCGTCAGCGAGCACAGGACAGGAATAGGCAGACACCATTTTCTACTGCTGCTCATGAGGCTGGGTTCTATTATTATGGTGGGAAGCTTGATGACATAACAGTTGTTGTGTCATACATAACTGGCTCAACATGTGTGAGTTTTTCGCCATCTTAG 1098 0.4918 MATSASNAVLLGDVYFDDVAAKPSGVRFRDRTRRAALRATVNLTRLQPLNGLLNFGCSTSDATWRSWNPSSLLVGTKHSSFPCCSAETTPHVQPLASSTFSVDQTNFGAERLKLFSGSCYLPHPDKEDYGGEDAHFICVDEQTVGVADGVGGWADVGVNAGLFARELMSHSVRAIEEEPKGSVDPARVLEKAHSFTKAKGSSTACIITLTDMGLHAINLGDSGFIVIRDGCTIFRSPVQQHDFNFTYQLESGNGCDLPSSGEVFMIPVAPGDVVVAGTDGLFDNLYNDEVAEVVLHAVGAGLEPQVTAQRIAALARQRAQDRNRQTPFSTAAHEAGFYYYGGKLDDITVVVSYITGSTCVSFSPS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03909 365 SMART PP2C_SIG_2 128 354 IPR001932 -
Spst3g03909 365 Gene3D - 126 252 IPR036457 -
Spst3g03909 365 FunFam 5-azacytidine resistance protein azr1 123 248 - -
Spst3g03909 365 Gene3D - 257 358 IPR036457 -
Spst3g03909 365 ProSiteProfiles PPM-type phosphatase domain profile. 118 354 IPR001932 -
Spst3g03909 365 PANTHER PROTEIN PHOSPHATASE 2C 86 355 IPR039123 -
Spst3g03909 365 SMART PP2C_4 105 352 IPR001932 -
Spst3g03909 365 Pfam Stage II sporulation protein E (SpoIIE) 144 352 IPR001932 -
Spst3g03909 365 SUPERFAMILY PP2C-like 119 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03909 Spst-Chr3 89184149 89189656 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03909 K17508 - gmx:100784475 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03909 3 89184149 89189656 Spst3g03909 3 89184149 89189656 ECH
Spst3g03909 3 89184149 89189656 Spst3g03909 3 89184149 89189656 PCT