Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03905 ATGAAGGATGAAGAGATCCCAATTGCGAAAAAGGAAACCCCAGCCTCAGATTCAGGTTTATTCGGAAAAGGAAGTTACAAATTCTGGGCACTAGCGGCCATATTGCTTCTCGCTCTGTGGTCCATGTTCACCGGCACCGTCTCGCTCCGGTGGTCGAGCTCACTCAACACGTTCTCCCATGACCTCCACGCGCCGCTCCACGACCACCACGACGTCCTCGAGATGGAGGAGAGAGAGAAGTTGGTGAGGTACATGTGGGACGTGTACACGAATAACCGTAAGATCAGGTTGCCGCGGTTCTGGCAAGAGGCCTTCGAGGCTGCGTTCGAGGATTTGAGCAGTGACGTGGCGGAGGTTAGAGACGCTGCCATCGCCGAGATTGCTAACATGTCTCTACGCTCCTTTGATATTCAATTGCCTTCTGTTGCACATTCTACGAGAGCACGGGAATTTGATAAGAACCTCGAGCAATTTGAGAAAGGAGAAGGTGCAACCTCCGTACGTGCTTAG 510 0.5235 MKDEEIPIAKKETPASDSGLFGKGSYKFWALAAILLLALWSMFTGTVSLRWSSSLNTFSHDLHAPLHDHHDVLEMEEREKLVRYMWDVYTNNRKIRLPRFWQEAFEAAFEDLSSDVAEVRDAAIAEIANMSLRSFDIQLPSVAHSTRAREFDKNLEQFEKGEGATSVRA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03905 169 Pfam Protein of unknown function (DUF1195) 13 140 IPR010608 -
Spst3g03905 169 PANTHER OS03G0411600 PROTEIN 10 158 IPR010608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03905 Spst-Chr3 89106428 89109236 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03905 - - var:108328789 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03905 3 89106428 89109236 Spst3g03905 3 89106428 89109236 ECH
Spst3g03905 3 89106428 89109236 Spst3g03905 3 89106428 89109236 PCT