Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03890 ATGGTGAACCTGGTAGCAGCGCAGAGGCCATTGCTGCATGTGCTGATGAAGATGGCCGGGATCAGACCCTACACGGTGGAGATTGAGCCCGGGACGTTGATGAGTTTCTGGGTCCCTTCTGAGACCATAACGAAGCCCAAGAAAAAGGACGAAAAGCCCAAAATCGCGGCCAAGCCCAGCAAGCCCACGGTGGTTCTGGTGCACGGTTTCGCCGCGGAAGGAATCGTGACATGGCAGTTCCAAGTGGGGGCGTTGACAAAAAAGTACGCTGTTTATGTTCCTGATCTTCTCTTCTTCGGAGGGTCGGCCACCGATAAAGCCGACAGGTCGCCGACGTTTCAAGCGGAGTGCTTGGTGACGGCGTTAAGGAAACTTGGGGTGGAGAAATGCATAGTGGTTGGGTTCAGTTATGGGGGAATGGTGGCGTTTAAGATGGCTGAGATGTACCCTGAAATGGTTGAAGCCCTGGTTATTTCTGGGTCCATTTTAGCCATGACGGACTCGCTGAGCGCCACCTCGTTGCAAGAGCTTGGGTTCTCTTCTTCTTCGGAGCTCTTGCTGCCAACCTCTGTCAAGGGTCTTAAGACACTCTTGTCCGTCGCTGCTCACAAAAAACTCTGGTTTCCCAACCGTTTGCACAAAGATTTTCTTGAGGTGATGTTCACGAATAGGAAGGAACGAAGTGAACTATTGGAGGGCTTGGTTATTAGCAACAAAGATATCACCATCCCCAAATTTTCTCAGAGAATACATCTTTTATGGGGCGAGAATGATCAAATTTTCAAACTGGAGCTTGCACAAAATATGAAAGAACAACTAGGGGATGACTCAACCTTAGAAAGCATAAAGAAAGCTGGTCATCTGGTTCACCTGGAGCGACCCTGTGCCTACAATAGATGTCTAAAGCATTTTATTGCTTCCTTCTTGGCCTCAAAATAA 939 0.4899 MVNLVAAQRPLLHVLMKMAGIRPYTVEIEPGTLMSFWVPSETITKPKKKDEKPKIAAKPSKPTVVLVHGFAAEGIVTWQFQVGALTKKYAVYVPDLLFFGGSATDKADRSPTFQAECLVTALRKLGVEKCIVVGFSYGGMVAFKMAEMYPEMVEALVISGSILAMTDSLSATSLQELGFSSSSELLLPTSVKGLKTLLSVAAHKKLWFPNRLHKDFLEVMFTNRKERSELLEGLVISNKDITIPKFSQRIHLLWGENDQIFKLELAQNMKEQLGDDSTLESIKKAGHLVHLERPCAYNRCLKHFIASFLASK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03890 312 Gene3D alpha/beta hydrolase 54 308 IPR029058 -
Spst3g03890 312 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Spst3g03890 312 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Spst3g03890 312 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Spst3g03890 312 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Spst3g03890 312 Pfam alpha/beta hydrolase fold 62 170 IPR000073 -
Spst3g03890 312 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Spst3g03890 312 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Spst3g03890 312 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Spst3g03890 312 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Spst3g03890 312 SUPERFAMILY alpha/beta-Hydrolases 60 306 IPR029058 -
Spst3g03890 312 PANTHER SI:DKEY-122A22.2 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03890 Spst-Chr3 88917747 88921127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03890 55 157 Acyl Lipid Metabolism Gene Families AT4G15960 32.743 6.98e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03890 - - gmx:100816070 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03890 3 88917747 88921127 Spst3g03890 3 88917747 88921127 ECH
Spst3g03890 3 88917747 88921127 Spst3g03890 3 88917747 88921127 PCT