Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03882 ATGGCAGCAGAATCATCAGAGGGCGAAGAAGAAACAAAATTGAGCGGAGGAAATCAATTGCTGACTGTAGACGATGACTTGATGGAGATGGGGAAAAAGGCTGCTTGGAGCGTCAGTTCTTGCAAACCCGGTAATGGCGTTTCCTCTCTCCGTGACGACAACCTCGAAACCTATTGGCAATCCGACGGAGCACAACCCCATTTGGTTAACATTCAGTTTCAGAAGAAAGTTAAACTTCAATTAATTGTGCTGTACGCGGATTTCAAGCTGGACGAAAGTTACACCCCAAGTAAAGTTTCCATCCGTGCCGGTGATGGGTTTCACAACCTGAAGGAGATTAAGACCGTGGAACTTGTGAAGCCAAGTGGATGGGTTTATCTGTCGTTGTCTGGAGTTGATCCTAGGGATACCTTTGTGAACACTTTCATGTTGCAAATTGCTGTGTTGTCAAACCATCTCAATGGAAGGGATACTCATGTGCGGCAAATCAAAGTTTATGGGCCTCGACCGAACCCTATTCCACACCAGCCATTTCAATTTACTTCGAGGGAGTTTATCACCTACTCTTCTATAAGATGA 579 0.4525 MAAESSEGEEETKLSGGNQLLTVDDDLMEMGKKAAWSVSSCKPGNGVSSLRDDNLETYWQSDGAQPHLVNIQFQKKVKLQLIVLYADFKLDESYTPSKVSIRAGDGFHNLKEIKTVELVKPSGWVYLSLSGVDPRDTFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPHQPFQFTSREFITYSSIR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03882 192 SMART APC10_2 27 191 IPR004939 -
Spst3g03882 192 FunFam Anaphase-promoting complex subunit 10 1 169 - -
Spst3g03882 192 Pfam Anaphase-promoting complex, subunit 10 (APC10) 19 189 IPR004939 -
Spst3g03882 192 CDD APC10 28 167 IPR016901 GO:0005680|GO:0031145
Spst3g03882 192 ProSiteProfiles DOC domain profile. 6 192 IPR004939 -
Spst3g03882 192 PIRSF APC10 2 192 IPR016901 GO:0005680|GO:0031145
Spst3g03882 192 Gene3D - 1 169 - -
Spst3g03882 192 SUPERFAMILY Galactose-binding domain-like 22 168 IPR008979 -
Spst3g03882 192 PANTHER ANAPHASE-PROMOTING COMPLEX 10 7 192 IPR016901 GO:0005680|GO:0031145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03882 K03357 - gmx:100526925 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03882 3 88833456 88835263 Spst3g03882 3 88833456 88835263 ECH