Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03880 ATGGCTTCTTCCATATGTGCTATCTCCCCTTCCGTCGCATCACACCTCACTAAAACCACCCCCCCTCTATTTCAACGAAGCAAGTGCAAAATGAGCAGGAGGACTTTTGCGGTTACGGGAATTGTCGGCTCCGGCGTTTCGGTCGCCGCTTCTACTCTCACTGCGGACGCTGAGCCGTCTTCCAAAGGTTTTGAAAGATTGCCCTTCAAAGCGGAAGGGTACAATTATTGGACTTGGAGGGATCATAAAATACACTACGTTGTGCAAGGAGAAGGCTCCCCCATTGTTCTTATTCATGGTTTTGGGGCCTCCGCATTCCACTGGAGGTACAACATTCCAGAATTGGCTAAGAAACATAAGGTATATGCCTTAGATTTGCTTGGATTTGGGTGGAGTGACAAAGCACTTATCGATTATGATGCCATGGTGTGGAGGGATCAAGTGGTGGACTTCGTGAAGGCAATAGTAAAAGAACCAGCAGTTTTAGTTGGAAATAGCCTCGGGGGATTTACTGCTTTGGTTGCAGCAATTGGGTTGCCTGAGCTTGTTAAAGGTGTTGGTCTACTAAATTCTGCCGGACAATTTGGTGATGGAAAAAGGGAAAGTCAAACATCTGAAGAAACAGCTCTACAAAAGTTTATCCTAAAGCCTTTGAAGGAAGTTTTCCAGCGTGTAGTTCTTGGATTTTTATTCTGGCAGGCAAAGCAACCAGCTCGGATTGTGTCAGTTCTAAAAAGTGTGTATATAAATTCGTCCAATGTGGATGACTATCTTGTGGAATCTATAACAAGGCCAGCTCAAGACCCAAATGCCGGAGAAGTTTATTACAGGTTAATGACACGGTTCATGATGAACCAGAGCAAGTACACTCTAGATGCTGTCTTAAGTGAACTATCTTGCCCGTTGTTGCTGCTTTGGGGTGACCTTGACCCTTGGGTTGGTCCAGGAAAGGCTAATCGAATCAAAGAGTTCTATCCAAAAACAACTCTTGTAAACTTGCAGGCTGGGCATTGTCCACATGATGAGATACCAGAACTTGTAAACAAGGCTTTATTGGATTGGTTGACCACCCTCACACCTGAAGCAACTCTCCAAACTGTTTGA 1104 0.4493 MASSICAISPSVASHLTKTTPPLFQRSKCKMSRRTFAVTGIVGSGVSVAASTLTADAEPSSKGFERLPFKAEGYNYWTWRDHKIHYVVQGEGSPIVLIHGFGASAFHWRYNIPELAKKHKVYALDLLGFGWSDKALIDYDAMVWRDQVVDFVKAIVKEPAVLVGNSLGGFTALVAAIGLPELVKGVGLLNSAGQFGDGKRESQTSEETALQKFILKPLKEVFQRVVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAQDPNAGEVYYRLMTRFMMNQSKYTLDAVLSELSCPLLLLWGDLDPWVGPGKANRIKEFYPKTTLVNLQAGHCPHDEIPELVNKALLDWLTTLTPEATLQTV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03880 367 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 25 358 - -
Spst3g03880 367 FunFam Alpha/beta fold hydrolase 72 358 - -
Spst3g03880 367 Gene3D alpha/beta hydrolase 73 358 IPR029058 -
Spst3g03880 367 PRINTS Alpha/beta hydrolase fold signature 118 133 IPR000073 -
Spst3g03880 367 PRINTS Alpha/beta hydrolase fold signature 176 189 IPR000073 -
Spst3g03880 367 PRINTS Alpha/beta hydrolase fold signature 162 175 IPR000073 -
Spst3g03880 367 Pfam Alpha/beta hydrolase family 95 349 IPR000073 -
Spst3g03880 367 SUPERFAMILY alpha/beta-Hydrolases 75 355 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03880 Spst-Chr3 88822956 88826353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03880 94 345 Acyl Lipid Metabolism Gene Families AT3G10840 25.490 5.86e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03880 - - gmx:100776976 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03880 3 88822956 88826353 Spst3g03880 3 88822956 88826353 ECH