Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03877 ATGGAAAGCTTGGCGCATTCTCGCCAACCAAACAAGTTTCCCGTCACGGTTTCCAAGAAAATCACCGGCGCCGCCGGAGGAGCCGGTTTTCAGCCGGAAACTCTATACGACCACGTCTACGGCGGGGCGCCGAGGTTTGCTGGTGGCCACGCTCTCTCGCCACGCTTCGAGGATTACGGCGAGATTTTCGCGAGCTTCCACGCACCGCGCGCCTCCGCCATTCCTGTGCTGGATCTTCCGGCGGTCGAGGGCGGTGACGTCTTCTTCGACTTCCGCAATGCCGCGTGCGACTATGCCGAAATATTCCGAGGCTTTGACGGCCTAGATTTTTTGCTATCATACGAGGACTTGTTTCGCGACGGTGTCTCCGAAGAAGACGACGGTAATGATGCTGAAGAGAAAGAAACCTGTGGAAACCCAACGCAGACGCCCGGGGAAACTGATTCATTTTCTGGAGACTTGGAACATTTTGGAATTAATCAAGGCATGTCAAATGGAGATCATTTGCGCTCTTTTGATGAAATTACAGAGTTCAACGTTTTGTATCATAAGGTCCATGGTACAGGCAATGAAGATATGTCAAAGGGGAAAAGTCATATAAGTCAGCTGCGTCCTGCTCCTGAATTCAATCATGTATTTGATGAAACCACGCACTTTCTTAGGACTGATCCCTCCTTACAGGTTGTTGATGATGTTGACCTTGATATGGAATTTAATGCAAGCCAGGCAAAGAGAAACCATCTGGGAGAAATGGTGTCACATCCGGTTAATTTTACTTCTGGAGAACAGGTTCTTGTTAGTGATCTTGATATGCATGGATGCTGCAGAAATGGTTCTCATTCCTGTGAAACGTTCATAACTGTGTCTGACATTAGCCTTAGAACTCTACCCTCTCAAGTGCCGCCTCCTTCTCGACCACCACCTGTACTGGATGAAAAACAAGGGTACACTAATGGTTTTCATTCAAACAATGAGGGGGTTGATTCTGAAGAGATTCTAGATGACACTTCACCACATTTCCTTGATGTGGAGGTTGATGCAAATTCATCCGTTGCTGCTTCTATTAAAGAAGTCATGCATAGACCTGAAGCAAAACTTCGGAGGGCCAAGGAATTGGAGAGAAAGAAGGAGTTTTCCGAAAGCATTGCAGGTTCAAGTTATGATGTAAAAAATAATGAAGCGAAGACAATTGTGAATATAACTAAAATTAATAGTTTGAATGATGAGGGTGTGCAGAAAATTAGTAAAAAGAAAATTTCTGCCGCAGAGGAAAGGCAGAAAACTAGGAAGGCTGCCCCAGAAACTCTGGTATCTTTAGAAGGGGAAAGGCTTATAAACATGTTTGATGAAACACATATCGAGGAATCTAGGTCATCTCAAGAATCAGATAGAAGTACTGGAGTTGGGATGTGGAAAGAAGCAACTGAATTTTTTGAATTGGTGGGAACAGAAGAATCTGGAAAGGTAATTACGCCCACAAATAACAGTCATACTGAGAAGCTGGTACAAGATACCAGAGTACATGAGCATGGCAAGAACGAAAGAGAAGCGTTTAATATTACAACAGAACACAAAAAGATTAAAGAAGTTGAAGGTTCTCAGCAGGAGGAATGCAAGGAGAAATATAAAGCAGGAAATGGAGCTCATGCACAGAGAAAAAACATTAAGAAATCTAAATTATCTAATGAGGAATGCAGGCAGAGAGAGCACGTGAAGAATGAGGATATGGCCGAAATATTTGAGCTAGAAAATAGTGAGATGGCAAGAATGGTCCGTCTGCATGGAAAAACCGATAAGGAAGTACCTAAAGCTGACCAATCAGGAAGCTTAAAAGACATGTTTGAGACACTACGCAATGAGCATGAACAAGTTGAGAGTGAGAAATCAAAAGAAGTTGATAGACAAATGTTAAGTGAAGTTCAGTGGAGCACGAAGCATATGGAAAGTGAGAAAAAACAAAAAGAGGATGAACAACTAAAATTGAGTATGAAAAGGCACAAACAGTCTCAGAGAATGAAAGAAAATGGAAAAATTCAAAGAGAAGCTTCTGCTCTCGGAGGTGTAGAGAGTGAGCAATGGGTGAGAGGTTCTGTGAAGCTAGAAAAATTTGAAAGATCAAATGAAGCCTTTAATCTGGATAGCCATGAGGTAAATATGTCTTGCAAAGGAGAAGATGAAATTATCCTTGAAGCCACACAGATTCAGAACAAGAAGCAATTGAAGGAGACATATGAAAATGAAGAAGTTGGGAAAAGCCTCAAAGGTTCTTTTACAATGGAAGAAAATTATGAACGTTTAAAGCATGCTCTTGAGCAGGTAAAGAATGAAAAGGGACTTAAACAGAACTTTGAACTTGAAATGAACGAGAAAAGAACTGAAGTGAATTTTGAGCTGGGGGAAAATAAGGCTTGTGAAACAGGTCAAGAGAATCTTAGTGAAGTTTGTGATGGGTATAGCAAAGTAAATAGACTAAAAGATGCGGGTGATAGTATATGGCTTCAGAAAGTTCTGAAAGATGCTCTTGAGCTACAAATGAATATTGGAAATGAGGCTCAGAGGAAGAAAGAAATCCACCGCCCATCAGACCTAGCATTTGACTGGGAAGGAACTGTGGATATATCTCGTGAGGATAGTCACTTCCAACAGTATGGCAGGATGCTCAATGATGCTAACAAGAATGGAAAAGATGAGGGATTGGGCAAAGCTTTGGAACAAGCGGGAGAAGGGATACACATTAATTTTACAAGTGAAACCAATGAAGCATGGAAAACAGAGAGTGATGGCAATCTTCTGGCAGCTCACTCATCCTCCATTCATAAAGAAAATATTTGCAAACAGGAGGTATGTCAAGACCCTATAGCTGACCATGAAATTGGAAAGAGTGTCACTGACTGCCTGATTGGTGAAAAGAAATTGGAAGAGGTATGGATGGAAAATCTAAAGGATAGTGGGAAAAAAGGGGCTTTTGAAATATCCCAAGGAGAAGCAGAGTATTCAGGAAAGGTGACTTGCACTACTACAAATATAGATGTCAACGAGCATAGTTTTAACAATGAACAGGCATGCACTGAGAAAACTAAAACAGCCCCTCAAATGGAGTTTGATGCTCGAAGTCGAGAGAGCACAATTTCTCATGAGGAGTGTGAGAGAGCAGAGACTAAACAAGTGAATGTTTCACTAAACCCTGAAGAAAGCCGGGACCAAATGTCATCAAGACAAGCTAACCTGCATAGTGATTATGGAAGGAACACAGTAGCTGATGAACCTGCTACAGTGCAAGAAGCAGTAAATATCCAGAAACCTTCTCAAAGAGCTCATGTGTTAAGCTCCACGAAAAGCGAAGATAAGAATCTTGATGAAACCTCTGCCTCAGTAGAGAAAGATGTTGTGAGGATAAGAAGAGAAAGAGTGTTGGAAAAAGATCGTCTCAGAAAGATTGAAGAGGAGATGGAGAGAGAAAGGGAAAGGCAGAAAGACAGAATGGCTGTTGACAGAGCAGTGCTGGAGGCTGAGAGGGAAAGGGAAAGAGGAAAGGATCGGATGGCAGTTGATAGAGTAACTTGGGAGGCTCGTGATAGAACATATGCTGAAGCTCGTGAGAGAGCAGAAAGGGCTGCATTTGAGAGAGCAACTGCAGAAGCTCGACAAAGAGTACTAGCTGAGGCCAGGGAAAGACTTGAAAAGGCATGTGGGGAGGCCAGGGACAAAGCATATGCTGATAAGGCTGCTGCAGAAGCCAGATTGAAAGCACAGCGAACTGCTGTGGAAAGAGCAACTGCAGAGGCCCGAGAGCGTGCAATGGAAAAAGTAAAGGTTGAGAGAGCGGCAGTTGAGTCCAGAGATCGATTAGGGAGATCTGTCTCTGACAAATTTAGTGTTTCGTCCAGAAACGGTGGAAGACAGGGCTCTTCATCGTCAGATATGCTGGATCCATATTGTCAGAACTCTAGCTCCTCCACTCATTCCAGATATCCATATTCCTCAGTTTATGGTGCTTCTTCTTTTACGGAAAGATCAGAACGAGAAGGTGAATCAGCTCAGAGGTGTAGAGCTAGACTGGAGAGGTATCGCCGGACAGCTGAGCGTGCAGCAAAAGCTTTGGAAGAAAAGAACATGCGGGACCTTGTAGCTCAGAAGGAGCAAGCTGAGAGAAATAGATTAGCAGAAACCCTGGATATTGAAGTCAGGAGGTGGTCAAGTGGAAAAGAAGGAAATTTGCGTGCTTTGCTTTCAACCTTGCAATACATTCTTGGGCCTGATAGTGGGTGGCAACCGATCCCACTGACAGACGTCATTACTTCTGCTGCTGTAAAGAAAGCTTACAGGAAGGCCACGCTTTGTGTCCATCCCGACAAATTACAGCAACGTGGAGCAAGTATTCAGCACAAATACATATGTGAAAAAGTTTTTGATCTCCTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAGCGATAG 4458 0.4314 MESLAHSRQPNKFPVTVSKKITGAAGGAGFQPETLYDHVYGGAPRFAGGHALSPRFEDYGEIFASFHAPRASAIPVLDLPAVEGGDVFFDFRNAACDYAEIFRGFDGLDFLLSYEDLFRDGVSEEDDGNDAEEKETCGNPTQTPGETDSFSGDLEHFGINQGMSNGDHLRSFDEITEFNVLYHKVHGTGNEDMSKGKSHISQLRPAPEFNHVFDETTHFLRTDPSLQVVDDVDLDMEFNASQAKRNHLGEMVSHPVNFTSGEQVLVSDLDMHGCCRNGSHSCETFITVSDISLRTLPSQVPPPSRPPPVLDEKQGYTNGFHSNNEGVDSEEILDDTSPHFLDVEVDANSSVAASIKEVMHRPEAKLRRAKELERKKEFSESIAGSSYDVKNNEAKTIVNITKINSLNDEGVQKISKKKISAAEERQKTRKAAPETLVSLEGERLINMFDETHIEESRSSQESDRSTGVGMWKEATEFFELVGTEESGKVITPTNNSHTEKLVQDTRVHEHGKNEREAFNITTEHKKIKEVEGSQQEECKEKYKAGNGAHAQRKNIKKSKLSNEECRQREHVKNEDMAEIFELENSEMARMVRLHGKTDKEVPKADQSGSLKDMFETLRNEHEQVESEKSKEVDRQMLSEVQWSTKHMESEKKQKEDEQLKLSMKRHKQSQRMKENGKIQREASALGGVESEQWVRGSVKLEKFERSNEAFNLDSHEVNMSCKGEDEIILEATQIQNKKQLKETYENEEVGKSLKGSFTMEENYERLKHALEQVKNEKGLKQNFELEMNEKRTEVNFELGENKACETGQENLSEVCDGYSKVNRLKDAGDSIWLQKVLKDALELQMNIGNEAQRKKEIHRPSDLAFDWEGTVDISREDSHFQQYGRMLNDANKNGKDEGLGKALEQAGEGIHINFTSETNEAWKTESDGNLLAAHSSSIHKENICKQEVCQDPIADHEIGKSVTDCLIGEKKLEEVWMENLKDSGKKGAFEISQGEAEYSGKVTCTTTNIDVNEHSFNNEQACTEKTKTAPQMEFDARSRESTISHEECERAETKQVNVSLNPEESRDQMSSRQANLHSDYGRNTVADEPATVQEAVNIQKPSQRAHVLSSTKSEDKNLDETSASVEKDVVRIRRERVLEKDRLRKIEEEMERERERQKDRMAVDRAVLEAERERERGKDRMAVDRVTWEARDRTYAEARERAERAAFERATAEARQRVLAEARERLEKACGEARDKAYADKAAAEARLKAQRTAVERATAEARERAMEKVKVERAAVESRDRLGRSVSDKFSVSSRNGGRQGSSSSDMLDPYCQNSSSSTHSRYPYSSVYGASSFTERSEREGESAQRCRARLERYRRTAERAAKALEEKNMRDLVAQKEQAERNRLAETLDIEVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDVITSAAVKKAYRKATLCVHPDKLQQRGASIQHKYICEKVFDLLKEAWNKFNSEER 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03877 1485 MobiDBLite consensus disorder prediction 122 153 - -
Spst3g03877 1485 Coils Coil 756 786 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 1095 1123 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 1109 1123 - -
Spst3g03877 1485 Coils Coil 1241 1261 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 1264 1326 - -
Spst3g03877 1485 Coils Coil 614 634 - -
Spst3g03877 1485 FunFam Auxilin-related protein 1 1356 1485 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 1024 1080 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 1288 1326 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 1054 1080 - -
Spst3g03877 1485 Coils Coil 1346 1385 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 1264 1287 - -
Spst3g03877 1485 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1169 1485 - -
Spst3g03877 1485 Coils Coil 1129 1160 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 542 563 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 297 323 - -
Spst3g03877 1485 SUPERFAMILY Chaperone J-domain 1329 1484 IPR036869 -
Spst3g03877 1485 Gene3D DnaJ domain 1359 1485 IPR036869 -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 664 683 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 135 149 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 664 678 - -
Spst3g03877 1485 Coils Coil 1195 1229 - -
Spst3g03877 1485 MobiDBLite consensus disorder prediction 1030 1053 - -
Spst3g03877 1485 CDD DnaJ 1433 1478 IPR001623 -
Spst3g03877 1485 ProSiteProfiles dnaJ domain profile. 1421 1485 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03877 Spst-Chr3 88808617 88814794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03877 - - var:108328718 2197.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03877 3 88808617 88814794 Spst3g03877 3 88808617 88814794 ECH