Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03873 ATGCCGACCTTTACTGCCATAGCATTTGATAGGTTGATAGAGCCTGGAGCTTCGAAACCTTCTTATAAATCTGCTCCGGTGCCGATGCCTGTCCCAAAGAAGCTCCAGAGGCTAAATAGTGAACCGACAGTAGTAAAGAAGCCCCCTCCTCGTCCTCAATTAAAACCAGCACTCTATGCCACACCTGAGGTGACGCCGCTTCCAGATGCACCTTCTTCATTCCCTCCTTCTCCGTACATTGTCAATCACAAACGCCGTGGCCCACGTCTCTTGAAGAGTTCTTCTGAGGCCAATGTGCAGGCGAAGCAGAAGGATCTTGATGATGCAAATAATAATGGTAAGATTAATGATTCTGTCGTTGCCAGTTCAGACGGTGATCTCCAAGTAGCTTCTGCAAACGCCGAACCTGTTATTGCTGAGGAGGAGCAGGTGAATGGTGTACATGATAATGGCCTTGGTAGCGACAATGGTGGTGACCTTGGGCACAGAGACAGGGAAAGTGAAAGTAGTGGTGTTCCTAATGGGTTACATAAGGATAAAGTGCTGGCATCAAATTTGGAAAGAGACGGTGAGACTGAAGACTTTTTTGATCCACACGATTCAATGAGTTTCAAAAGTGGCACAGATGGTGAGGATAATACAGGCATGGAACAAGCTGTGAAACGTTCAGAATTTTTTGATGCTTGGGAAGAACTCTCTTCTGACAGTGGGACTCAAAATTCTCACCGTGATGTTGAAGCTGATTTGCGTGAAATAAGGTTGAGTCTATTGATGGAGATAGAGAAGCGGAAGCAGGCTGAAGAATCCCTTAACAGCATGCAAAACCAGTGGGAGAGACTTAGACAAGGGTTATCTCATATGGGAATTATTTTGCCGGCTGACCTTACTACCGAGGATCCGCCGCCGAGTTCTGATCCTCTGGAAGATGTATTTCAGCAACTTTACATTACTAGGTTTATATCAAACAGCATTGGGAGAGGAATTGCCAGGGCAGAAGTGGAAATGGAGATGGAAGCTCAATTAGAGACAAAGAACTTTGAGATTGCTCGACTGTTGGAACGTCTCCACTGTTATGAGACCATGAATAGGGAGATGTCTCAGAGGAACCAGGAAGCAGTAGAGATGGCACGGCGTGAGAGACAAAGAAGGAGTAGGAGGCAGAGATGGATTTGGGGCTCCATTACTACCACGCTTGTACTTGGTACTGCAGCAATAGCAGGGTCCTATCTCTCGGTGGGTAGAGGATCAACATCTGCAGTTCATGATCCGATTCTTGAACATGATGATGCAGCCAACTAA 1299 0.4634 MPTFTAIAFDRLIEPGASKPSYKSAPVPMPVPKKLQRLNSEPTVVKKPPPRPQLKPALYATPEVTPLPDAPSSFPPSPYIVNHKRRGPRLLKSSSEANVQAKQKDLDDANNNGKINDSVVASSDGDLQVASANAEPVIAEEEQVNGVHDNGLGSDNGGDLGHRDRESESSGVPNGLHKDKVLASNLERDGETEDFFDPHDSMSFKSGTDGEDNTGMEQAVKRSEFFDAWEELSSDSGTQNSHRDVEADLREIRLSLLMEIEKRKQAEESLNSMQNQWERLRQGLSHMGIILPADLTTEDPPPSSDPLEDVFQQLYITRFISNSIGRGIARAEVEMEMEAQLETKNFEIARLLERLHCYETMNREMSQRNQEAVEMARRERQRRSRRQRWIWGSITTTLVLGTAAIAGSYLSVGRGSTSAVHDPILEHDDAAN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03873 432 MobiDBLite consensus disorder prediction 141 179 - -
Spst3g03873 432 MobiDBLite consensus disorder prediction 191 215 - -
Spst3g03873 432 MobiDBLite consensus disorder prediction 158 173 - -
Spst3g03873 432 PANTHER BACTERIOPHAGE N4 ADSORPTION B PROTEIN 1 430 - -
Spst3g03873 432 Coils Coil 92 112 - -
Spst3g03873 432 Coils Coil 362 382 - -
Spst3g03873 432 Coils Coil 256 283 - -
Spst3g03873 432 MobiDBLite consensus disorder prediction 16 122 - -
Spst3g03873 432 MobiDBLite consensus disorder prediction 191 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03873 Spst-Chr3 88787680 88790479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03873 - - pvu:PHAVU_003G255500g 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03873 3 88787680 88790479 Spst3g03873 3 88787680 88790479 ECH
Spst3g03873 3 88787680 88790479 Spst3g03873 3 88787680 88790479 PCT