Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03867 ATGAAAGTAGCACAGGTACTGCACATGAACGGAGGCGTTGGAGATGCAAGCTATGCAAACAACTCCTCTGTCCAGCAAAAGGTAATCCGTTTGACAAAACGAATTCGAGAGGAAGGCATTAGAAGCCTCTATTGCAGCACGCTCCCCAAAAGTTTGGCAATTGCAGATTTGGGTTGCTCCTCAGGACCAAACACTTTGTTTGTTGTGTCCGAACTCATCAAAACTGTGGAGAAGCTTTGCAGACAGCTGAACCATAAATCTCCAGAATACAAGGTGTTTCTGAATGATCTCCCTGGGAATGACTTCAACAACATCTTTAAGTCCCTTGACACCTTCAAAGAGAAATTGTGTGATGAAATGGAAGGTAGGATTGGTCCATGCTACTTCTCTGGGGTTCCCGGTTCTTTCTATGGCAGGGTTTTCCCAAACCGAAGTTTGCATTTTGTTCATTCCTCTTACAGCCTTCAATGGCTATCTAAGGTTCCTGAGGGTTTAGACAACAACAAGGGCAATATTTACTTAAACAGAACAAGCCCATCAAATGTTGTGAGAGCTTACTATGACCAGTTTCAAAGAGATTTCTGTCTTTTTCTCAAGTGTCGAGCAGAGGAACTTGTTGAAGGAGGTCGTATGGTTCTCACATTTTTGGGAAGAAGAAACGACGATCCATGCAGCAAGGATGGTTGCTACATCTGGGAGCTCATGGCTACTGCTCTTAATGATATGGTCTCCGAGGGAATCATAAAGGAAGAGGAAGTAGATAGTTTCAACATCCCTCAATACACTCCGTCACCGTCTGAAGTGAAACTGGAAGTGCTTAAAGAAGGATCATTTTGTATGAAGTGTCTAGAAGTGTCTGAAGTGAACTGGAATGTTTTCGATGATTGGAACGCTGCTGAGTTTGAATCGGAAAGGTGTGACTCAGTTGGTGATGGTGGATACAATGTGGCACAGTGCATGAGGGCTGTGGCAGAACCTTTGCTGGTTAGCCACTTTGGTGAAGATATCATTCAAGAGGTTTTCAGCCGCTACCAACAAATCTTGGCTGATCGAATGTCCAAGGAAAAAACTAAGTTCATCAACGTTACCATACTATTGACTAAGAAAACATAA 1113 0.4322 MKVAQVLHMNGGVGDASYANNSSVQQKVIRLTKRIREEGIRSLYCSTLPKSLAIADLGCSSGPNTLFVVSELIKTVEKLCRQLNHKSPEYKVFLNDLPGNDFNNIFKSLDTFKEKLCDEMEGRIGPCYFSGVPGSFYGRVFPNRSLHFVHSSYSLQWLSKVPEGLDNNKGNIYLNRTSPSNVVRAYYDQFQRDFCLFLKCRAEELVEGGRMVLTFLGRRNDDPCSKDGCYIWELMATALNDMVSEGIIKEEEVDSFNIPQYTPSPSEVKLEVLKEGSFCMKCLEVSEVNWNVFDDWNAAEFESERCDSVGDGGYNVAQCMRAVAEPLLVSHFGEDIIQEVFSRYQQILADRMSKEKTKFINVTILLTKKT 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03867 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 369 IPR029063 -
Spst3g03867 370 Gene3D - 6 355 IPR042086 -
Spst3g03867 370 Gene3D Vaccinia Virus protein VP39 21 357 IPR029063 -
Spst3g03867 370 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 357 IPR005299 GO:0008168
Spst3g03867 370 FunFam Jasmonate O-methyltransferase, putative 31 162 - -
Spst3g03867 370 Pfam SAM dependent carboxyl methyltransferase 40 368 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03867 Spst-Chr3 88737764 88740832 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03867 K21483 - gmx:100170650 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03867 3 88737764 88740832 Spst3g03867 3 88737764 88740832 ECH