Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03846 ATGGAGCACTTAGAGATGGTGAGTGAAGTGAAACACCAAAGAATCAAAGCCAACGGAATATGGATACACGTGGCAGAGAAAGGGACAGGTCCACTTGTTCTTCTGCTTCATGGCTTCCCAGAATTATGGTATGCCTGGCGCCACCAGATAAATTACTTGGCCCAACATGGCTATCATGCGGTTGCACCCGATCTAAGAGGATATGGTGACTCTGATTCTCCTATTGATCCTACTTCTTACACTTTACAACACCTTGTAGGTGACCTTATAGGTTTGCTTGACCATTTTGGTGAACAACAGGCATTTGTTGTTGGATCTGATTGGGGATCAGTCATTGGATGGCATCTGAGCCTGTTTAGGCCTGACAGAGTCAAAGGATTTGTTTGTCTGGGTGTGCCTTACCACCCAAGATCTCCCACTGCTAAAACGGTTGAAACTATCAGAAAATTATTTGGAGATCAGAGTCATGTCTGCCAGTTCCAGGAACCAGGTAGAGCAGAGAGAGCTTTCGCTAGATATGATTATTTGACAGTGATGAAGAAGTTTATTCTGATGACATATACAGATTTTCTAGCATCTCCACCGGGCATGGAGCTTATCGATTTCTTGCCAACACCTTCGTTCGTGCCATCATGGATAACTGAGGAAGAACTCACAGTCTTTGCAGACAAATTCCAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCCATGGACTTAAACTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGATAACAGTTCCAACGAAGTTCATAGCAGGAAACAAAGACATAGCTTTTGATTTGGAAACAGTGGGTACAAAGGCTTTTGTAGAAAGTGGTGTTTTCAAGAGCCTTGTTCCGAACCTTGAAGTGGTTATAATAGACGGCCACCATTTTATACATCAAGAAAAAGGCCAACAAATTTCGCATGAAATCCTTTCCTTCATCCGTAAATTTAATCCCAATGCTTCCATATAA 990 0.4293 MEHLEMVSEVKHQRIKANGIWIHVAEKGTGPLVLLLHGFPELWYAWRHQINYLAQHGYHAVAPDLRGYGDSDSPIDPTSYTLQHLVGDLIGLLDHFGEQQAFVVGSDWGSVIGWHLSLFRPDRVKGFVCLGVPYHPRSPTAKTVETIRKLFGDQSHVCQFQEPGRAERAFARYDYLTVMKKFILMTYTDFLASPPGMELIDFLPTPSFVPSWITEEELTVFADKFQESGFTGPLNYYRAMDLNWELLAPWQGSKITVPTKFIAGNKDIAFDLETVGTKAFVESGVFKSLVPNLEVVIIDGHHFIHQEKGQQISHEILSFIRKFNPNASI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03846 329 PRINTS Epoxide hydrolase signature 257 273 IPR000639 GO:0003824
Spst3g03846 329 PRINTS Epoxide hydrolase signature 37 55 IPR000639 GO:0003824
Spst3g03846 329 PRINTS Epoxide hydrolase signature 103 116 IPR000639 GO:0003824
Spst3g03846 329 PRINTS Epoxide hydrolase signature 57 72 IPR000639 GO:0003824
Spst3g03846 329 PRINTS Epoxide hydrolase signature 297 319 IPR000639 GO:0003824
Spst3g03846 329 PRINTS Epoxide hydrolase signature 117 130 IPR000639 GO:0003824
Spst3g03846 329 FunFam Epoxide hydrolase 8 323 - -
Spst3g03846 329 Gene3D alpha/beta hydrolase 7 326 IPR029058 -
Spst3g03846 329 Pfam alpha/beta hydrolase fold 31 151 IPR000073 -
Spst3g03846 329 SUPERFAMILY alpha/beta-Hydrolases 8 322 IPR029058 -
Spst3g03846 329 PANTHER EPOXIDE HYDROLASE 12 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03846 Spst-Chr3 88503223 88504809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03846 6 324 Acyl Lipid Metabolism Gene Families AT3G51000 63.975 1.25e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03846 - - pvu:PHAVU_003G257900g 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03846 3 88503223 88504809 Spst3g03846 3 88503223 88504809 ECH