Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03839 ATGTCCCTGCGTCCCAAAATTGAGAAGGCCGACGTCCCCGTCGTCGACATTAATAGCGATAGTGACGACGGCGTCACGACCGTCGAGGTAGTTCCCACCAAAAAATCCGCGTTAACACAGAAGATTTCATCGCGTCGAGTCGAGCTTGTGCAGCAAGAAACCCCTGCGCCGAGTTCCGCACCTTCGGTCTCCGGTGGTCTGTTCCGAAGTTTCTGGAAAGCTGGGGATTATGCAGTTGGTCCCTCCTTGAAGCCCGCTCCCTTTCAAGGTCACTTGGAACATGCTCGGGTGCACCCCAAGTTTCTGCATTCAAATGCAACTTCTCATAGATGGGCTTTTGGAGCAATTGCTGAGCTCGTGGATAATGCTGTTGATGAGATTCACAATGGTGCAACTTTTGTAAAGATTGACAAGTTTGATGTTAAGAAGGATAATTCACCCGCATTATGTTTCCTAGATGATGGTGGTGGAATGGATCCTAACTCAATTCGAAAATGCATGAGCTTGGGTTATTCATCAAAGAAGTCAAAGACAACAATTGGACAGTATTTTGACATATCTGGCCATTGGGCTGAGCCAATTATTTATAGCTCACAGGATGAATGGTCAGCGAACTTGAAAACAATTATGGATTGGTCTCCGTTCACATCAAAGGAGGAGCTCATGCTTCAGTTTGATGATATAGGATCACATGGAACCAAAGTTCTAATATACAATTTGTGGTTGAATGATGAAGGGATATATGAATTGAGTTTTGATGATGATGTTGAGGATATTATGCTGAGAGATGAGGCCAGCCAAGGGGCTGAGAAAAAATTAAACAAAAAAACTGTTCAGCTTCAGTCTCATATTTCTTACCGCATTCGTTATTCTTTACGGGCATATGTTTCGATGTTGTACCTTAGAAAATTTTCTAACTTCGAAATCATACTAAGGGGGAAACTTGTGGATCAATTCAACATTGCAGACAACTTAATATATTTAAAAGTAATTCCATATAGGCCTCAGCTAGCCATTGCATCAAAAGAGGACATAGCGGAAACAAAGACAACCATTGGATTTATAAAGGAGGCTCCTTCTATTAAGGTTACTGGATTCAATGTGTACCATAAAAATCGACTAATCAAGCCCTTTTGGAAAGTAGTTTCAGATGGTTCATCAAAAGGGAGTTGTGTTGTTGGAGTTCTTGAAGCCAATTTTATAGAACCAGCGCATGACAAGCAGGATTTTGAGAGATCAGTGCTATTCATTCGGTTGGAAAACAAGCTGAAACAAATGACAATGGATTACTGGAAAGGCCACTGTCACTTGATTGGATATCAGCCGTCAAATTTCAGATCAGAAAATGGGATAAAAGAAGCTCACAATCAAAAGTCAGCTGAACATTCAACTAATCCACAGAATGAGTTGTTTGTTAATCAACAGGTTACTGGCAGGGTAGCTGAGCATCGAAACACCCTGAATCAGCCGGTTGTTGGTCTTGATGTGACTGGCATGCAAGATTTAAGTCATGAGAAGCGGGGTACAATGGTAGGAACTCCAAAGTCTGTATCTGTTGATGAAATCTGTGCAGAAAACATAAAACTTTTCGAGAGGTGTGAGGAGTACAGGCTAAAGGAGACAGAACTGAAAAAGACGGTTGTAATCTTGGAGGAGGAATATAAACAAATCCAGAAGAAATGCGCCGTTCTTACTTCAATCTTGGAGACCAAGAGGAAGGAGAAGTGTTAA 1731 0.4177 MSLRPKIEKADVPVVDINSDSDDGVTTVEVVPTKKSALTQKISSRRVELVQQETPAPSSAPSVSGGLFRSFWKAGDYAVGPSLKPAPFQGHLEHARVHPKFLHSNATSHRWAFGAIAELVDNAVDEIHNGATFVKIDKFDVKKDNSPALCFLDDGGGMDPNSIRKCMSLGYSSKKSKTTIGQYFDISGHWAEPIIYSSQDEWSANLKTIMDWSPFTSKEELMLQFDDIGSHGTKVLIYNLWLNDEGIYELSFDDDVEDIMLRDEASQGAEKKLNKKTVQLQSHISYRIRYSLRAYVSMLYLRKFSNFEIILRGKLVDQFNIADNLIYLKVIPYRPQLAIASKEDIAETKTTIGFIKEAPSIKVTGFNVYHKNRLIKPFWKVVSDGSSKGSCVVGVLEANFIEPAHDKQDFERSVLFIRLENKLKQMTMDYWKGHCHLIGYQPSNFRSENGIKEAHNQKSAEHSTNPQNELFVNQQVTGRVAEHRNTLNQPVVGLDVTGMQDLSHEKRGTMVGTPKSVSVDEICAENIKLFERCEEYRLKETELKKTVVILEEEYKQIQKKCAVLTSILETKRKEKC 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03839 576 Coils Coil 533 560 - -
Spst3g03839 576 Gene3D - 98 249 IPR036890 -
Spst3g03839 576 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 183 575 IPR045261 GO:0016887
Spst3g03839 576 Pfam Morc6 ribosomal protein S5 domain 2-like 290 431 IPR041006 -
Spst3g03839 576 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 114 183 - -
Spst3g03839 576 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 111 249 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03839 Spst-Chr3 88402961 88440074 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03839 - - gmx:100781431 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03839 3 88402961 88440074 Spst3g03839 3 88402961 88440074 ECH